KEGG   Kryptolebias marmoratus (mangrove rivulus): 108240979
Entry
108240979         CDS       T05608                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:kmr01009]
    108240979 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108240979 (kdm5a)
Enzymes [BR:kmr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108240979 (kdm5a)
Protein phosphatases and associated proteins [BR:kmr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108240979 (kdm5a)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108240979 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_UBR7-like PHD_5 PHD_JHD1
Other DBs
NCBI-GeneID: 108240979
NCBI-ProteinID: XP_017280306
UniProt: A0A3Q2ZS25
LinkDB
Position
LG18:16201639..16215945
AA seq 1738 aa
MSAFAEFVPPPECPVFEPSWEEFSDPLGFINKIRPIAEKMGICKIRPPQDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKILDLYQLSKIVSS
EGGFETACKEKRWSKVASRMGFPPGKGTGSLLRSHYERILYPYELFQSGASLTGLHRLYD
DATDGEEVDEGVGEETAEEEEQDEEDEKDKEGDVAQTKEQLHPERRSRRLKSERENKEPK
GLKIFGTSPKMVGLEILSADDGFIKKQRHLKAQAFAIKMRPRKETLEVNFIDLYLCLVCG
RGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQAVRE
YTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKEVGS
GFPVKDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELFDSQPDLLHQLVTIM
NPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPLGRQCVA
HYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVVKEMGEMIEEETKLREIIQEMGVRS
SEQEVFELFPDDERQCYKCKTTCFLSALTCSCFSERLVCLHHAKDLCDCPLSNKCLRYRY
DLEEFPSMLYGVKTRAQSYDTWSKRVTEALAADQKNKKDLIELKVLLEDAEDRKYPENTL
FRRLRDMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRSKLTVDELKAFVDQLYRLPC
IISQARQVKELLETVEDFHERAQVALSDEMPDSSKLQELLDLGSGLDVELPEVPRLKQEL
QQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEVLTVSERWEDK
ARACLQARPRHSMVTLESIVLEARNIPAYLPNILALEDALQKAKEWTSKVEAIQSGSSYA
YLEQLENLLARGRSIPVRLNPLAQVESQVASARAWRERTARTFLKKNSTHTLLQVLSPRV
DIGVYSNSKKRKRVKELLEKDRGGFDPDTLSDLEESLEEVRDPSAVVAAFKAKEQKEVDA
IHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKTGTQKKV
GVGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQ
DRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQTFQ
QSGFSRATSPRQCVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSEEVVS
HMWPTATPSFCAEHAYSSASKSCVQNLGTPRKQPRKTPLVPRSLEPPVLELSPQAKAQLE
DLMMLGDLLEVSLDETQHIWRILQATQPPTEERFLQVMEPDTSLMEKPLKLKLKDSEKKR
KRKLERAEHHHMLMATAGGSSAMGDIRLSKSKELKRVGLELCLGGKPKKKKLKLNLEKSR
EMKQLAKRLAKEEKERKRKEKAAVKAEAIKEGFEKRKEKKILDIPSKYDWSGAEDSNDEN
AVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICLDCSEKAAGAGR
GMTVEEAAAEEDDEEEGVVLLSACGVVQSAPSAASWSSARHINPAAPSVQQQDPQQIS
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgtccgcgtttgccgagttcgtgccccctcccgagtgcccggtgttcgagccgagctgg
gaggaattctcggaccctctggggttcatcaacaagatccgacccattgcggagaaaatg
ggcatctgcaagatacggcctccacaggactggcagcctccgttcgcctgtgacgttcgc
aactttcgcttcactccaagagtgcaaagactgaacgaactcgaggctctcactcgggtc
aaactaaactttctggatcaaatcgcgaagttctgggagctgcagggatcgaagattcga
ttccctcatgtggagagaaagattctggacctctatcagctcagcaagatcgtgtcgtcc
gagggcggctttgagacggcgtgcaaagagaagaggtggtccaaagtggcgagtcggatg
ggcttccctccgggaaaaggcaccggttctcttttgcgttcacactacgagaggatcctc
tacccgtacgagcttttccagtctggagcttcactcaccggtctccaccggctgtacgat
gatgccaccgacggggaggaggttgacgaaggagtcggcgaggagacggccgaggaggag
gagcaagacgaggaggatgaaaaggacaaggagggtgatgtggcgcagaccaaagagcag
cttcatcccgagaggcgctccagacgtctgaagtcagagagggaaaacaaggagcctaaa
ggcctcaaaatctttggaacgagccctaagatggtcggcttggagattctctctgctgac
gatgggttcattaagaagcagcggcacctcaaagcccaagcctttgccatcaagatgagg
ccacgcaaggagaccctggaggtcaactttatcgacctttatctctgcctggtttgtgga
cggggcgacgaagaggaccggctcctgctgtgcgacggctgtgacgacagctaccacacc
ttctgcctcatcccgcctctgcaggacgtgcccaagggggactggcggtgcccgaagtgc
gtcgcagaggagtgcagtaagcccagagaggcgtttggcttcgagcaggctgtgagggag
tacactctgcagagcttcggagaaatggccgaccacttcaaatcggactatttcaacatg
cccgttcacatggttcctacagagttggtggagaaggagttctggcgtctggtcagcagc
atcgaggaggacgtcatcgtggagtacggagctgacatcagctccaaggaggtgggcagc
gggtttcccgtgaaggacggcaagaggaggctcctgggagacgaggaggaatacgccaac
tcgggctggaacttgaacaacatgccggttctggagcagtcggttctcacgcacatcaac
gtggacatatcgggcatgaaggtaccctggctctatgtggggatgtgcttttcctcgttc
tgctggcacatcgaggaccactggagttactccatcaacttcctgcactggggggaaccc
aagacttggtacggcgtaccggcttctgcagcagagaaactggaggctgtaatgaaaaaa
ctggctccagagctttttgactcccagcccgacctcctccaccaactggtcaccatcatg
aacccaaacatcctgatggagcacggcgttcccgtgtacaggacgaatcagtgtgcgggg
gagtttgtggtgaccttccccagggcgtaccacagcggcttcaaccagggctacaacttc
gccgaagctgttaacttctgcaccgccgactggctgccactggggcgtcagtgtgtcgcc
cattaccggcgactccaccgttactgcgtcttctcccacgaggagctgttgtgcaagatg
gccgccgaccccgagagcctggacgtggaactggctgctgccgtcgtcaaggagatgggc
gagatgatagaagaggagacaaaactcagagagatcatccaagaaatgggggtgaggtcg
tctgagcaggaggtcttcgagctctttccagacgatgagcgtcagtgctacaagtgtaag
acgacctgtttcctgtcggcgctgacctgctcctgcttctcagaacggctggtttgtctc
caccacgcgaaagatctctgcgactgtccgctcagcaacaagtgtctccggtatcgttat
gatctggaggagtttccgtctatgctttatggcgtgaagactcgggctcagtcctatgac
acctggtcgaagagggtgacagaagctttggcggcagatcagaaaaacaaaaaagatctg
attgaactcaaggttttgctggaggatgcggaggacaggaagtaccccgagaacaccttg
ttccggcgcctgagggacatggttaaagaagcggagacgtgctcctcggtggctcagctg
ctgctcagccgcaagcaaaggcacagcagccgccttcgttctgaaagcagccgtaatcgc
agtaaactgaccgtggatgagctcaaagccttcgtggaccagctctaccggctgccttgt
ataatcagccaggcgagacaagtcaaggagttactggagaccgtggaggacttccacgag
cgggcccaggtggctctatcggacgagatgccggactcctccaagctgcaggaacttttg
gacctgggcagcggcctggacgtagagctgcccgaggtgccccgactcaaacaggagctg
cagcaggctcgttggctcgacgaggtgcgcgtcacccttgctgagccccaccgtgtcact
ctggaactgatgaagaggctgatagattctggagtgggtctggctccacatcacgcggtg
gagaaggcgatggcagagctgcaagaggtcctcaccgtctccgagagatgggaggataag
gcgcgggcgtgcctgcaggccagacctcggcacagcatggtgaccctggagagcatcgtt
ttggaggcgaggaacatcccggcatatctgcccaatattttggctctggaagacgccctg
cagaaggcgaaggagtggacttctaaggtggaggccatccagagcgggagcagctacgct
tacctggagcagctggagaacctcctggcccgaggtcgctccatcccggtgcggctcaac
ccgctggctcaggtggagtctcaggtggcttcagctcgagcctggagggagaggactgct
cgcaccttcctcaagaagaactccacacacactctgctccaggttctcagcccacgtgta
gacataggcgtttacagcaacagtaagaaacggaagcgggtcaaggagctcctggagaag
gaccgaggtggtttcgacccggacaccttgagcgacctggaggagagcctggaggaagtg
cgagacccttcagccgtcgtagctgccttcaaagccaaagagcagaaggaggtggacgca
attcactccctccgtgcagccaatttagccaagatggccatggcggatcgcatcgaggag
gtgaagttctgcctgtgtcgaaagaccgccagcggcttcatgctgcagtgcgagctttgc
aaggactggttccacggagcgtgcgtccctctgcccaagacggggacgcagaagaaagtg
ggcgtgggttggcagagcaacagcaaagactctaaattcctgtgcccgctgtgtcagagg
tcgaggaggccgcgactggagaccatcctgtccctgctggtgtcgctgcagaagttgccg
gtgcgtctgccggaaggagaagctctgcagtgtttaacagaaagagcgatgagctggcag
gaccgagcacgtcaagctctggcgacggaggagttgtcctcagcgctggctaagctgtct
gtgctgagccagcgaatggtggagcaggcggcgagggagaaaactgagaagatcatcaac
gctgagctgcaaaaagctgctgccaatcctgatctgcagggccacatccagacttttcag
cagtccggtttcagcagagccacgtccccacgccagtgcgtggactacgatgacgaagag
actgactcagacgaggacatccgggagacttacggttacgacatgaaggacccaggcgag
gtgaagccctacttgttctgcgatgaggagattcccgtcaagtcggaggaggtggtcagt
cacatgtggccaactgctacgccgtcgttctgcgccgaacacgcctactcgtctgcatcg
aagtcctgtgtgcaaaacctgggcacgcccagaaagcagcccaggaagacccctctggtc
cctcgaagcctggagccgccagtgttggaactgtccccgcaggctaaggcccagctggag
gacctgatgatgctgggagacctgctggaggtgtccctggatgagacccagcacatctgg
agaatcctgcaggccacgcagcctcctaccgaggagagattcttgcaagtcatggagcct
gacacttctctgatggagaagcctctgaagctgaaacttaaagattcagagaagaaaaga
aaacggaagttggagagagccgagcaccaccacatgctaatggccaccgccggcggctcc
tcggccatgggagacatccggctgtccaagtccaaggagctgaagagagtcggcctcgag
ctctgcctcggcggcaaacctaagaagaagaagctgaagctgaacctggaaaagagccgg
gagatgaagcagctggccaaacgattagccaaggaggagaaggagaggaagaggaaggag
aaggcggcggtgaaggcggaggccatcaaagagggcttcgagaaacggaaggagaagaag
atcttggacattccctccaagtacgactggtcgggggccgaggactcgaatgatgagaac
gcagtgtgtgcagcgaagaactgtcagcggccgtgtaaagacaaggtggactgggtccag
tgcgacggaggctgcgacgagtggttccatcaggtctgcgtgggcgtttcctgcgaaatg
gcagagaacgaggactacatttgcctggactgctcggagaaggccgccggggcgggcagg
ggcatgactgtcgaggaggcggcggcggaggaggacgatgaggaggagggcgtcgtgttg
ctgtcagcgtgcggcgtcgtgcagagcgctccgtcggcggcctcgtggtcgtcggcgcgt
cacatcaacccggcggcgccttcggtccagcaacaggaccctcagcagatcagctag

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