Kryptolebias marmoratus (mangrove rivulus): 108240988
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Entry
108240988 CDS
T05608
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X2
KO
K12327
caldesmon
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108240988 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108240988 (cald1a)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108240988 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
108240988
NCBI-ProteinID:
XP_017280324
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Position
LG18:15751887..15815168
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AA seq
593 aa
AA seq
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MDDLDFERRRELRRQKREEMRLEAERMLRNDDDEEEAARERRRRERQERLRRRESEEPSS
QPENQVVTNSHSVTESVSVSSSSSSYAGGGDDEDQALLDRMAKREERRQRRMKEALERQR
QLEPDATEAAEEERPSSWRRGRSRDSLDEEEKAPAANSVKPEEPKEEEEAAPERKEEEEE
QKVEAEENKLRRSNLREQELAEDDTVVSEGSNQARSANSQAEEAAVASGEDEEVPEDENV
DKPTESEPLLLRHEEKCEVSEDNEVDERRGYKEDREDQWKHNGGLDEEAEPKQHRKPERT
PSRGSVRSPEAAAGDEQDEDARLEAERKLEKLKRRRDDAESEEFERMRQKQQEAEAELEE
LKRKREERRKVLEEEERQRKQEEAEKKAREEEEKRKMKEEIEKRRAEAAEKRQKAEDTVD
GEGKPFKCVSPRGSSLKIGERAEFLNKSAQKSAVKASHSPVVSKIDNRLEQYTSAAQREN
KESRSPRGAISDLPLVTDVRNIKSMWEKGDVFSSPGSGGAFKEAAVIKTGVAGRINDWLN
KTPEGGKTSGGRPADLKPVDVTNKRSLWENKGASPAKMADRAETKSVANGMGH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttggactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggctgaacggatgctgaggaacgacgatgacgaggaggaggccgcccgcgag
aggaggcgcagggagcgccaggagcggctgaggagaagggagagcgaggagcccagcagc
cagccggagaaccaggtcgtcaccaacagccacagcgtgacagagtcggtgtccgtgagc
agctcctcctcctcctacgccggcggcggagacgacgaggaccaggccctgctggaccgc
atggccaaacgggaggagcggcggcagaggcgcatgaaggaggcgctggagaggcagcgg
cagctggagcccgacgccacggaggccgccgaggaggagaggccctcctcctggcgccgg
gggcgttcccgcgacagcttggacgaagaggagaaggcgccggcggcgaacagcgtgaag
ccggaggagcccaaagaggaagaggaggctgctccggagagaaaggaggaggaggaggag
cagaaagtggaagctgaggaaaacaaactgaggaggtccaacctaagagagcaggagctc
gccgaagacgatacggtagtcagtgagggttcaaatcaggcccggtcagcaaactcgcag
gccgaggaggccgccgtagcatcaggggaagacgaagaggtacccgaggatgagaatgta
gataagcccacagagagcgagcctttgttactcagacatgaggaaaagtgtgaggtatct
gaggataatgaggtggacgagagacggggctataaggaggacagggaggatcagtggaag
cacaacggagggctggacgaggaggcggagcctaaacagcacaggaaacccgagaggacc
cccagccgcggcagcgtgcgctcccccgaggcggcggcgggcgacgagcaggacgaggac
gcccgcctggaggccgagcgcaagctggagaagctgaagcgccgccgcgatgacgccgag
agcgaggagttcgagcggatgcggcagaagcagcaggaggccgaggccgagctggaggag
ctgaagaggaagagggaggagaggaggaaggtgctggaggaggaggagcgccagcgcaag
caggaggaggccgagaagaaagccagggaggaggaggagaagaggaagatgaaggaggag
atcgagaagcgaagagcggaggctgccgagaagaggcagaaggcggaggacacggtggac
ggggagggcaaaccgttcaagtgcgtcagcccccgcggctcctctctgaagatcggagag
agagcagagttcctgaacaagtcggctcagaaaagcgcggtgaaggcgtcccattccccc
gtggtgtccaagatcgacaaccggctggagcagtacacctcggctgctcagagagaaaac
aaggagtcccggtctcctcgcggcgccatttccgacctccccctggtcactgacgtccga
aacatcaagagcatgtgggagaagggcgacgtgttcagctcgcccgggagcggcggcgcg
ttcaaggaagcagctgtgataaagacgggcgtggcgggccgcatcaacgactggctgaac
aaaacccccgagggcggcaagacgtcaggaggaaggccagcggacctgaagcccgtcgac
gtcaccaacaagcggagtctatgggagaacaaaggcgcctctccggcaaagatggcggac
agggcggagaccaaatctgtcgccaacggtatgggacactaa
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