Kryptolebias marmoratus (mangrove rivulus): 108241024
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Entry
108241024 CDS
T05608
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108241024 (cdh17)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Major cadherins
108241024 (cdh17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
108241024
NCBI-ProteinID:
XP_017280402
UniProt:
A0A3Q2ZRH6
LinkDB
All DBs
Position
LG16:12610938..12622726
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AA seq
868 aa
AA seq
DB search
MTPMVHLLLLPFLFSIAGGTNLDEKKGPFENTVLDVPEGTPVPYPVYQFQVTHEGVNDFS
LSGEGEDSIKISKDGWLYLQKPLDWSREDHYIFNVEALADGEVVDGPVVVTINVLDVNNN
APYFNQSSYTATVREKTASGVVFTRVFASDRDDPDTPNAHLSYSLVSQIPNNHNVLLFQI
HPDTGEISISEEGEEMLKARQGIQYSRGDDRSIDALKGKFDQYCPAQTIPYEQNPFFTCV
ERAEIRRRNVNPLEDPDYTLIVRVQDMGGASEHALSGNTRVHIVVQQNLWVNPGPVAIKE
NLKGEYPQVIAKVQSNDPDAVYSLVQKERELTFPFQITENGEILVTQELDREEKETYILV
VFAKDNYDSEVDPPMEILVLVEDLNDNKPVCGEESVFEVQEDEPTGSLVGQYVARDDDKE
GTLNAQLTYTIVSQTPATESNTFFMDESSGSIKALRVLRRNEHQVYNLSVRVSDSVFSTD
CQVIVKVIDVNNELPLFEKNDYGNHTLAEDTPVGHTVLTIRATDADDPGTGSSLIEFHIS
AGDENEVFAVESDDMGVGHLVIAKPLDFESSPTYELKIDARNPEPLMKGLKYGDESTAVV
IVTVTDVDEAPEFSLDRLEVTVAENFTRGSVLLTVEAKDPEGKEIGFKMDGDSQGWLEID
AATGEVRTKEKLDREKLETFEVTVTAFEKENPEKSSERVVHVRLLDVNDNIPKLTETQAF
ICMQDIKPVVIKAEDKDSAPFSQPFTFALEKKSPNWELHKIDATSAEVRLKKQPIKEANI
SLNINIKDNAGVGVTQAFEVRVCNCTSLGHCYIPPYGRGFKPGIGSTVGILAGILGFCII
IFIIVIKRTSKKSKKKGQTDEQETNAMM
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgctgctcccattcctgttcagcattgctggtgggacg
aatttggacgaaaagaagggcccgtttgagaacacggtgttggacgtgccagaggggaca
ccagtaccctatcccgtctatcagttccaggtgacacatgagggtgttaatgatttcagc
ctgagcggggagggcgaggacagcattaaaatctccaaggatgggtggctttacctgcag
aagcctctagactggtcacgagaggaccactacatcttcaatgtggaggcgttggccgac
ggcgaagtcgtggacggccccgtggtcgtgaccataaatgtgctggacgtgaacaacaac
gctccgtacttcaaccagagcagctacacggctacggtccgagaaaagactgcgtcaggt
gtggtcttcacccgagtgttcgcgtccgaccgggacgacccggacacccccaacgcccat
ctgagctacagcctcgtcagccagatccccaacaaccacaacgtcctgctgttccagatc
caccccgacaccggggagatctccatctcagaagaaggggaggagatgctgaaggccaga
caggggatccagtacagccggggagacgatcgcagcatcgatgccctgaaagggaagttt
gatcagtactgtccagctcagaccatcccctatgagcagaaccccttcttcacctgcgtg
gagagagcagagattaggaggcgtaacgtgaaccccctggaggacccggactacaccctg
atcgtgcgcgtgcaggacatgggaggagcttcagagcacgcgctgagtggaaacaccagg
gtgcacattgtcgtgcagcagaacctctgggtcaaccccgggccagtagctattaaagag
aacttaaagggagaatacccccaggttattgcaaaggtccagtctaacgaccccgatgcc
gtctactccttagtgcagaaagagcgagagctgacgttccccttccagattacagaaaat
ggagaaattcttgtgacgcaggagctggacagagaggagaaagaaacgtacatcctggtg
gtgttcgccaaggataactacgactcggaggtggatccgcccatggagattttggtcctg
gtggaggacctgaatgacaacaaaccagtgtgtggtgaagaaagtgtgtttgaggtgcag
gaggatgaacctacaggcagtttggtgggacagtatgtggctcgtgatgatgataaagaa
gggacgctgaacgctcagctgacctacaccatcgtgtcccaaacaccagccactgaatcc
aacactttcttcatggacgaatcttccggcagcatcaaggctcttcgcgtccttcgccgg
aacgagcaccaggtctacaacctcagcgtcagagtcagcgattcagttttcagcacggac
tgtcaggtcatcgtcaaggtgatcgacgtcaacaacgagctgcctctgttcgagaagaac
gactacggcaaccacactctggcggaggacactcctgtggggcacacggtgctgaccatc
agggcaacagatgctgatgaccccggcaccggcagctcgctgatcgagttccacatctcc
gcaggcgacgagaacgaagtcttcgccgtggaaagtgacgacatgggagtgggtcatctg
gtcatagccaagcctctggactttgagtcctctccgacctacgagctaaagatcgacgcg
cgcaaccccgagcctctgatgaaaggcctgaagtacggcgacgagtccaccgccgtcgtg
atcgtgaccgtcactgacgtggacgaggccccggagttcagcctggaccgcctggaagtg
actgtggcggagaacttcacgagggggtcggtgctgctcacggtggaggcgaaggaccca
gaggggaaagagatcggatttaagatggacggcgactctcagggctggctggagatcgac
gccgccacaggagaggtcaggaccaaggagaagctggacagagagaagctggagaccttc
gaagtcaccgtcactgccttcgagaaggagaaccccgagaagtcctccgagcgagtcgtg
catgtgcggctgctggacgtcaacgacaacatccccaagctgacagagacgcaggccttc
atctgcatgcaggacatcaagcccgtcgtcatcaaggccgaagacaaggacagcgccccc
ttctctcagccgttcactttcgccctcgagaagaaatctcccaactgggagctgcacaaa
atcgacgccacgtcagctgaggtgcgcctgaagaagcaaccaatcaaagaagcgaacatc
tctctgaacatcaacataaaagacaacgcgggcgtcggagttacgcaggcgtttgaggtg
agagtgtgcaactgcacatcgctgggccactgctacatcccgccgtacggacggggattc
aaaccgggaattggctccacggtcgggatcctggcaggaattctgggattctgcattatt
atcttcatcatagtgatcaaacgcacaagtaagaagagcaagaagaaaggccagaccgac
gaacaggagacgaacgccatgatgtag
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