Kryptolebias marmoratus (mangrove rivulus): 108241029
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Entry
108241029 CDS
T05608
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108241029 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108241029 (snx27b)
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Others
Others
108241029 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108241029 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
RA_3
Motif
Other DBs
NCBI-GeneID:
108241029
NCBI-ProteinID:
XP_017280410
UniProt:
A0A3Q2ZJI8
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All DBs
Position
LG16:complement(11650004..11664093)
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AA seq
573 aa
AA seq
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MADVTGQGISSPVPPLPLPASRNGSGSGDVTPDTGGSGGGGGWQTPTTVASGPRLVRIVK
SDSGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVN
VEGATHKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDGSALSCYDYSDKQAVPISIP
SYKHTELNSEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFAFPKLPGKWPFSLS
EQQLDARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIATPDKTTLT
VRVRKNSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTS
AIPGTCLTLRKWLFTTDEEILLSDNQLALSYFFHQALDDVKKSFIKVEEKSYQLQKLMEQ
KKMSMYLSLLRSCDGYNEIIFPHCSCDSRRKGHVITAISIQNFKLHACTEEGTLENQVIS
FDWGEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVE
EEAIDKDNKNCSKDGICGKNIFQLLRHRRDGGT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcacgggacaaggaatcagttccccggtccctccgttgcctctccctgcc
tcccgcaacggctccggcagcggcgacgttaccccagacaccggcggcagcggcggcggc
ggcggctggcagacgccaaccaccgttgcctcgggcccgaggctcgtccggatagtgaag
tccgactcgggctacggcttcaacgttcgggggcaagtcagcgaggggggccaactgcgg
agcatcaacggggagctgtacgccccgctgcagcacgttagcgccgtcctcccgggggga
gctgccgacagagcgggcatctccaagggggaccggatcctcgaggtcaatggggtaaac
gtggagggagccacgcacaagcaggtggtggacctgatccgggccggtgagcgggagctg
gttctggccgtgctgtccgtcccgccgcaggaggccgactgcctggatcccggcgacgac
ggatcggccctctcctgctacgactactcggacaagcaggccgtccccatctccattcct
agctacaaacacaccgagctcaacagtgagaagtttgtggtttacaacgtgtacatggca
ggcagacagctgtgctccaagcggtaccgggagttcgtgattctgcaccaaaacctgaag
agggagttcgccaactttgcgttccccaagctgccggggaagtggccgttctcgctgtcg
gagcagcagctggatgcgcggcgccgaggcttggaggagtacctggagaaagtgtgctct
gtacgggtaatcggagaaagtgacatcatgcaggagttcctgtctgaatcagatgagaac
tacaacggcgtgtcagacgtggagttgagaatagccacgcccgataaaacgacgctcact
gtcagagtgcgcaaaaactccaccacggaccaggtttatcaggctgtggtgatgaagctc
gggatggacagcgtgacagccagctacttcgctctgttcgaggtcatcaaccacaccttc
gtgcgtaaactcgcccccaacgagttcccccacaaactgtatgtacagaactatacctca
gccatcccaggaacctgccttactctgcgcaagtggctcttcaccacagacgaggagatt
ctgctcagcgacaaccagcttgctctcagctacttcttccaccaggctcttgacgacgtg
aagaagagcttcatcaaagtagaggagaagtcttaccagctacagaaactgatggagcag
aagaagatgtccatgtacctgagtttgttgagaagttgcgacggctacaatgagatcata
ttcccccactgttcctgcgactccaggcgtaaaggccacgtgatcacagccatcagcatc
cagaactttaagctgcacgcctgcacggaggaaggcacgctcgagaatcaggtgatctca
ttcgactggggggagatgcagcggtgggacacagacgaggagggcatggctttctgcttc
gagtacgcgcgaggcgagaagaagccccgctgggtgaagatttttactccttattttaac
tacatgcacgaatgcttcgagagagtcttctgtgagctgaagtggcggaaagaggtggaa
gaggaggcgatagacaaggacaataagaactgcagtaaagacggtatatgcggcaagaac
atcttccagctgctgcggcacagaagagacgggggcacgtag
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