Kryptolebias marmoratus (mangrove rivulus): 108241037
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Entry
108241037 CDS
T05608
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108241037 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108241037 (prpf3)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108241037 (prpf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF4011
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
108241037
NCBI-ProteinID:
XP_017280428
UniProt:
A0A3Q2ZU47
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Position
LG16:complement(11283989..11291446)
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AA seq
698 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAG
GFVERLFEALEESRNSRGNKGAGEKNRKRELKDVFGEEVDSSAMKETPEVGDGTTVKRKR
VPRFQEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFTPSATSASVDA
ATVTRLLGSGGVGGGSSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGTLGN
TGPQNFVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRMPTLKA
NIRAVKREQFRQQLKEKPGEDLESTSYFDLRVPMGPAQRTRRSFRFHDPGRFEKIAQRVR
TKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIEEGEVPSIEWWDSFILPSNIAVNP
DTKFEEFDLFGVTNLVEHPAQMSPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQE
KVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVESFVRDRMFKRQKIHEEANAARKLTA
EQRKEKKVKKLKEDLTDGVHIAVYRIRYLQNPAKKFKVEANANQLYLTGTVVLHKDVNLV
VVEGGPKSQKKFKKLMLHRIKWEEHNSKRDDPDGDDDAKRNNKCWLIWEGTAKERSFGEM
KFKQCPTENMAREHFRKHGTEHYWDLALSHSVLDGTDD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctaagcgggaggtggaggagttgagaccctgggtggagcgcactgtgaag
aaggtgctgggtttctctgaacccactgtggtcactgcggctttacactgtgtgggaaag
gggctggataagaggaagactacagaccagctgcgtcctttccttgacgactccgccgga
ggttttgtggagcgactttttgaagctctggaggagagccgcaactcccgtggcaacaaa
ggagccggagaaaagaaccgcaagagagaactcaaggatgtctttggagaagaggtggac
tcgagtgccatgaaagaaacgcccgaggtgggagatgggacgactgtgaagcgaaagcga
gtccctcgttttcaggaggtcgaggagcctgaggtcatacccggacctccatctgaaagc
ccaggcatgctcaccaaaatgcagatcaaacagatgatggaagccgccacaaagcagatc
gaagaaagaaagaaacagctgagctttacgccttcagccacatctgcatcagtcgacgct
gcgacagtcacacggcttctcgggtctggcggagttggcggcggctcgtctatcgccccc
tcccaggccgccagctttatgaacgacgccatcgagaaggcccgcaaggccgctgagcta
caggcccgcatccagtcccagctggcgatgaagcctgggatcctcgggactttggggaac
accgggcctcaaaactttgtcgcgctcgccaatctgcacgcaatgggaatcgctccaccg
aaagtagaaattaaagaggtgaacaagccgacgcctctgattctggacgacaagggcaga
actgttgatgcttcgggcaaagaggttgaactcacacatcgtatgccgacgctcaaagct
aacattcgggccgtgaagagggagcagttccgtcagcagctgaaggagaagcccggggag
gacctggagtccacgtcctacttcgacctgcgtgtacccatgggtccagctcagcgcact
cgcaggagcttcagattccacgacccgggccgtttcgagaagatcgctcagagagtcaga
accaaggcccagctggaaaggctgcagaatgagatcgcccaggctgcgaagaaaacggga
atccaggcttctaccaaactggctctgattgctcctaaaaaagagatcgaagaaggggag
gtgcccagcatcgagtggtgggactccttcatcttgccctccaatatagcagtaaatcca
gacacaaagtttgaagagttcgatttgtttggcgtaaccaacctagtagaacatcccgcc
caaatgagtccaccagtcgacacggataagccggtaacactgggcgtgtacttgacaaag
aaggagcagaagaaactaagaagacaaacgcgcagagaggggcagaaagaagtgcaggag
aaggtccgtttgggactgatgcctccaccagaacccaaagtacgcatctccaacctcatg
agagtcttggggacggaggcggtccaggaccccacaaaagtggagagctttgtgagagat
cggatgttcaaaagacaaaaaatccacgaggaagccaacgcagctcggaagctcacggcg
gagcagaggaaagagaagaaggtcaagaagttaaaagaggacctcactgacggtgttcac
atcgcagtttacaggatccgatatttgcaaaatcccgctaagaagttcaaagtcgaggct
aatgctaaccagctgtacctgacgggcacagttgttctgcacaaagacgtcaatctcgtt
gtggtggaaggaggccctaaatcccaaaaaaagttcaagaagctgatgcttcacagaatc
aagtgggaggaacacaactctaaaagagatgatccagatggtgatgacgatgcaaagagg
aacaacaagtgctggttgatttgggaggggacagcaaaggagcgtagctttggcgagatg
aagttcaagcagtgccccactgagaacatggcccgggaacacttcaggaagcacggcacg
gagcactactgggacctggcgctcagccacagcgtgttggacggcaccgatgactga
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