Kryptolebias marmoratus (mangrove rivulus): 108241148
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Entry
108241148 CDS
T05608
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108241148 (rnf115)
04121 Ubiquitin system [BR:
kmr04121
]
108241148 (rnf115)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108241148 (rnf115)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108241148 (rnf115)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108241148 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
C1_2
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108241148
NCBI-ProteinID:
XP_017280603
LinkDB
All DBs
Position
LG16:11385415..11393537
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AA seq
311 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGSNGLDDTAT
QFAELWHLLLLERPFTADRDSPDSEPRLPGGRLGGFGDLGGLGGGSVGGSVPAGLGGPMG
GLLGAGDHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVSGSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVSITQEQADCC
MECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRMSLNGEDSSSQTPSLS
TDPRTQERWSF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcggtttttctgtcactgctgtaagggagaa
gtaaaccctaagctcccggaatacatctgtcccagatgtgattcgggtttcatcgaggaa
gtcaccgaggattccagtctcctcgagggcggctcaaacgggctggatgacacagccaca
cagtttgcagagctatggcaccttttgttactggagcggccgtttacagcagacagagac
agtcccgactcggaaccccggctcccaggaggacgcctggggggtttcggcgatcttggg
gggctgggaggtggatcggtcgggggatccgtcccagcgggtctcggaggacccatgggg
ggcctgctcggagccggggatcactggggacctgggcgcccgcctcgcctacacagccag
aggagatacaggtccagaggcagcagcaggccggatcgctcgcccgccgtggaagggatt
gtacaacagtttcttgccggtctctttgccaactccggagtttctggctcacctcctctg
tcctggacggggatgctccactccaacccgggagactacgcgtgggggcagggaggccta
gacgccgtcataactcagttactcggtcagctggagaacaccggacctccaccagcagag
aaggagaagatctcctccctccccaccgtcagcatcactcaggaacaagcagactgctgt
atggaatgtccagtgtgcaaagaggacttcgcagtgggagaaccagtcagacagctaccc
tgtaaccacttctttcattcagactgtatagtaccgtggctggaaatgcacgacacgtgt
cccgtgtgtaggatgagcctgaacggagaagacagcagcagccagaccccgtccctgtcc
acggacccccgcacacaggagagatggtccttttga
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