Kryptolebias marmoratus (mangrove rivulus): 108241153
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Entry
108241153 CDS
T05608
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108241153 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108241153 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108241153 (itga10)
04810 Regulation of actin cytoskeleton
108241153 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108241153 (itga10)
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin alpha subunits
108241153 (itga10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_3
FG-GAP_3
vWA_SIBA-E
FG-GAP_2
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
108241153
NCBI-ProteinID:
XP_017280611
UniProt:
A0A3Q2ZE49
LinkDB
All DBs
Position
LG16:11349921..11378177
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AA seq
1168 aa
AA seq
DB search
MELFKSLLCLEFILLLKALCQCFNIDEKHPRIFTGPEDALFGFSVLQHEADGEKSMLVGA
PWDGPLNSRTGDVYKCVVGEEKNSVCSKVNLGKAALQNVSKNLSNSHLGMTLTPNSPDGF
LACAPLWSQECGTSMFSTGICASVSDNLEPKETIAPTEQKCQTFMDIVIVVDGSNSIYPW
AEVQKFLSNILSKFHIGSDQMQVGIIQYAENAVHLWSLKDYKTTRDVVEAAKNISRQEGR
ETRTADAIQVACTEAFSAERGAREGATKVMIVVTDGESHDGDDLPAALDECDSRNVTRYA
IAVLGYYIRKQQDPETFINEIKSIASDPDEKYFFNVTDEPALNDIVDALGDRIFTLEGTL
GYNQSTFNMEMSQVGFSMHVLDDGILFGIVGAYDWDGGVLKEGASGRITPPREAFESEFP
LELKNHAAYLGYTVSSVVIGDWRTLYVAGAPRFKHKGKVILFELGDDRSVEIVQALNGEQ
IGSYYGSEVCGLDVDRDGITDVLLVAAPMFLSSGNKEAGKVYIYTLSGEGVFVSNGTLRS
EQKAQDARFGYVLAAAPDLNHDGFNDLVVGAPLEDEHRGAVYVFHGHEIYILHGHKQRIS
GSSLSPALRYFGRSVSARMDLDGDDLTDLAVGAQGQVVLLSSRSVVQINVGLSFQPHSIN
VIQKTCQRGGRESACLNATVCFTAVSHSPESHSSPFALWVSATLDDRKQSARALFDDSSH
RQIQLSLRVQTGKTLCHKLPFHVYDTADYIRPIVFSLQFKLNDSETGPVLDEGWSTTVNK
SIPFFKDCGEDDVCTTDLVLQARMDVSGTRQKPHVIRGPRRRLAVDVQLQNRLENAYNTS
LKLHYSRNLHFSSLSIKEDANFKMECTALGSNSHSCNVSYPVFRSHSKVNLMLEFEFSCT
SLQSRVHVKLNATSDSMEREDTLGDNSVQLQSFVQYQPDLFVSSTSNLNRYEVHPTRTAS
EAIGPEFYTHIRLQNLGCYTLSKLELHVFLPSVAAGDAVFMTVTDVHSYNATGVNCSVLS
DVARLKARQRDVRPLHPEDMLHNEVLNCSRSWCTEVVCEVQQLGHDATIRVTRRVHDDFF
RKPKYKSVRIVSTFDLTAQETSLIRLGAGIIRGETVLEVLKGRAIPISLWILIGSIIGGL
LLLALLIFVLWKLGFFARKHREDENHED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttcaaatccctgctgtgcctggagtttatcctcctccttaaagcgctgtgt
cagtgtttcaacatagacgagaagcatccgaggatcttcaccggtccggaggacgctctg
tttggcttctccgtgttgcaacacgaagcagatggagagaaatcgatgctggtcggagcg
ccgtgggatgggccgctcaacagcaggacgggagatgtgtacaaatgtgttgtgggggag
gagaaaaactcagtctgcagtaaagtgaatctaggtaaagctgctcttcaaaatgtttct
aaaaatctgagcaactctcatctgggaatgaccctcacaccgaactcacctgacggcttc
ctggcctgcgctcctctatggtcccaggaatgtgggacgtctatgttcagcactggcatc
tgcgcttccgtcagcgacaacctagaaccgaaagagaccatcgctccaactgagcaaaag
tgccagacgttcatggacatcgttatcgtcgtggacggttcgaacagcatctacccctgg
gccgaagtccagaagttcctcagcaacatcctcagcaagttccacatcggctcggaccag
atgcaggtcggcatcatacagtacgcagagaacgcggtccacttgtggtctttgaaggac
tacaagaccacgcgggacgtggtggaagccgccaagaacatcagccggcaggaggggcga
gagacgcggaccgcggacgccatccaagtagcctgcaccgaggcgttcagcgctgagcgc
ggcgcgagggagggcgccaccaaggtgatgatcgtggtgacggacggggagtcgcacgac
ggggacgacctgccggccgctctggacgaatgcgacagcaggaacgtcaccagatacgcc
atcgccgttctgggttattacatccgcaaacagcaggacccggagacgttcatcaacgag
atcaagtccatcgccagcgacccggacgagaagtatttcttcaacgtgacggacgagcct
gcgctgaacgacatcgtggacgccctgggagatcggatctttactctggaaggtacgctg
ggctacaaccagagcaccttcaacatggagatgtctcaggtcggcttctccatgcacgtc
ctggacgacggcattctgtttgggatcgtgggcgcctacgactgggatggtggggtgttg
aaggaaggggccagcggacggatcaccccgcccagagaagcgttcgagagcgagtttcct
ctggagctcaagaaccacgccgcttatttaggctacaccgtgtcctcggtggtgatcgga
gactggaggacgctgtacgtggccggagcgcctcgcttcaaacacaagggcaaggtgatt
ctgttcgaactcggcgacgacaggagcgtggagatcgttcaggccctgaacggcgagcag
atcggctcctactacggcagcgaagtgtgcgggctggacgtcgacagggacggcatcacc
gacgtgcttctggtcgccgcgccgatgttcctcagctcgggcaacaaggaggcggggaag
gtctacatctacaccctcagcggggagggggtgttcgtatcgaacgggacgctccgctcc
gagcagaaggcccaggacgccaggttcggctacgttctggcagcagctccagatctgaac
cacgacggctttaacgacctggtagtgggggcgccgctggaggacgagcacaggggcgcc
gtgtacgtcttccatggacacgagatttacatcctccacggtcacaagcagcgtatatcg
gggtcgtcgctctcccccgcccttcggtacttcggccgcagcgtgagcgcacgcatggac
ttggacggggatgatctgacggacctggccgtgggcgctcagggacaggtggtgctgctc
agctcccgaagcgtcgtccagatcaacgtgggcctgtccttccagcctcactccatcaac
gtcatccagaagacgtgtcagagggggggccgggaatccgcctgcctgaacgccaccgtc
tgcttcacggccgtgtcccactcgcccgaatcccacagcagccccttcgctctgtgggtg
tcggccacgctggacgacaggaagcagtcggcgcgggcgctctttgacgacagctcccac
cggcaaatccagctctcgctccgagtccagacgggaaaaactctgtgtcacaagctgccc
ttccacgtctacgacacggcggattacatccgtcccatcgtcttctcgctgcagttcaag
ctcaacgactcggagacgggtccggtcctggatgaaggctggtcgactacggtcaacaag
tccatcccgttcttcaaagactgcggcgaggacgacgtctgcaccacagacctggtcctg
caggcgcgcatggacgtctccgggacgaggcagaagccgcacgtgattcgcggccctcgc
cggcgcctggcggtggacgttcagctccagaaccggctggaaaacgcctacaacaccagc
ctgaagctgcactattcacgcaacctccacttctccagcctgagcatcaaagaggacgcc
aactttaagatggagtgcacggctctcggctcgaacagccactcgtgtaacgtcagctac
ccggtgtttcgctcccattcgaaggttaatttaatgctggagttcgagttcagctgcacg
tctttacaaagccgagtgcacgtgaagctcaacgctaccagtgacagcatggagagggag
gacaccttaggggacaacagcgtccagctgcagagttttgtccagtatcagccggacctg
ttcgtcagcagtacctccaacctgaaccgctacgaggtccatcccacgcggacggcatcg
gaagcaatcgggccagagttttacacacacatcaggctgcagaatctcggctgttacact
ttgagtaagctggagctgcacgtcttcctgccctcggtggctgcaggagacgccgtcttc
atgacagtcaccgatgttcactcgtacaacgccacgggggtgaactgcagcgtgctgagc
gacgtggcccggctgaaggccaggcagagggacgtccggcccctccaccctgaagacatg
ctgcacaacgaagtactgaactgcagcaggtcgtggtgcacagaagttgtgtgtgaggtg
cagcagcttgggcacgacgccaccatccgggtcacccgcagagttcacgacgactttttc
agaaaacccaaatataagtcggtgaggatagtaagcacctttgacctcacagctcaggag
actagcctcatcaggctgggcgcaggaataatccgaggggagaccgtactggaggtgctg
aagggtcgagccattcccatctcgctctggatcctgatcggcagcatcatcggcggcctg
ctgctgctcgcgctccttattttcgtactgtggaagcttggcttcttcgcgcgcaaacac
agagaggatgaaaaccacgaggactga
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