Kryptolebias marmoratus (mangrove rivulus): 108241168
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Entry
108241168 CDS
T05608
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108241168 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108241168 (rae1)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108241168 (rae1)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108241168 (rae1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108241168 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR41
ExoI_SH3
Motif
Other DBs
NCBI-GeneID:
108241168
NCBI-ProteinID:
XP_017280638
LinkDB
All DBs
Position
LG4:complement(22029021..22034866)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGTNSSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLETQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggaacaaactcgagttttggaaccggaggaactggagtctttgggagc
acaactacagacagccataaccccatgaaggatgtggaagtgacatcaccgccagatgac
agcatcagctgtctggctttcagtcctccaaccatgccaggaaacttcctcattgcagga
tcctgggctaatgatgttcgatgttgggaggtgcaggacaatggacagactgtccccaaa
gcccaacagatgcacacaggtccagtactggatgtctgctggagtgatgacgggagtaaa
gtcttcaccgcgtcttgtgacaagacagccaagatgtgggatctgaacagcaatcaagca
atgcagatcgcacagcacgacggtccgattaaagcgatccactggataaaagcccccaac
tacagctgtgtcatgacaggcagctgggataaaacgctgaagttctgggacacccgctct
cccaatcccatgatgtccctgcagatgcctgagagatgctactgtgcagatgtcgtgtac
cccatggcggtggtagccacagctgagagaggccttatagtgtatcagctagagacccag
ccctctgagtttcgccgaatagattcccctctcaaacatcagcaccgctgtgtcgccata
ttcaaggacaagcagaacaagcccacaggctttgcacttggaagcattgagggccgagtg
gcgatccattatatcaatcctccgaacccagccaaagataacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggatatttatgctgtgaatgccatctcc
ttccatcctgtccacggcacactggccaccgtgggctcagacggacgcttcagcttctgg
gacaaagacgctcgcaccaagttgaagacctcggagcagctcgaccagcccatcacagct
tgctgcttcaaccacaacggcaacatctttgcctacgcctccagctacgactggtcaaag
ggccacgagtactacaacccccagaaaaagaactacatcttcctgaggaacgctgcagag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system
