Kryptolebias marmoratus (mangrove rivulus): 108241240
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Entry
108241240 CDS
T05608
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X2
KO
K21878
Usher syndrome type-1G protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108241240 (ush1ga)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108241240 (ush1ga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
108241240
NCBI-ProteinID:
XP_017280746
UniProt:
A0A3Q3AF12
LinkDB
All DBs
Position
LG12:9166503..9174656
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AA seq
469 aa
AA seq
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MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVSRGGDPDK
CDIWGNTPLHLVAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKHTSLNPKLVSKLKDRAFREAERRIKECVKMQKKHRKRMERKFHKESSEASVSDVMSF
SSYTGSSVSHKLRNFNTVSMPYSQVTLHATNRGKTKIQKKLEKRKQGDGTFKIYEDGRKS
VRSLSGLQLGNDVMFVKQGTYVNPKERRRNVRDMFPRDNDDAISRAMSEPDLHGPDVDYS
EISTDSGHDSLFNRPGLGTMVFRRNYVTGGMFDLNARDATSLANSGSNVRLRSRLHQYPS
LDEDSIGSAHSLQERNVEELPWEEVELGLDDDDEPDTSPLEVFLATQSMSEFYSIFKREK
IDLEALLLCSDHDLKSIHIPLGPRKKILDACNRRLETMEEPDGIEDTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccataaggcggccagggacggctacctggacctgctgaaggaggcg
acgaggaaggacctgaacgcgccggacgaggatggcatgaccccgacgctatgggcggct
tatcacggcaacctggaggctctgcggctcatcgtgtcccggggaggagacccggataaa
tgtgacatatgggggaacacgccactccacctggtagctgctaacggtcacctcaactgc
ctcttcttcctggtctcttttggtgccaatatttggtgcctggacaatgactaccacacg
ccgctggacatggctgccacaaaaaatcacatggactgtgtccgctacctggattccatc
gccgccaagcacacgagcctcaatcccaagctggtcagcaagctgaaggacagggcgttt
cgtgaggccgaacgacggatcaaagagtgcgtgaagatgcagaagaagcaccgcaagcgg
atggagcgcaagtttcataaagagtcctccgaggcatctgtgtcggatgtcatgagcttt
tccagctacaccggcagctcggttagccacaagctgcgcaactttaacactgtcagtatg
ccatattctcaggtaactctccatgccacaaaccgcgggaagacaaagatccaaaagaag
ctggagaagagaaaacaaggagatggcacctttaaaatctacgaagatggaaggaagagt
gtgcgctctctttctggactgcagctgggcaacgatgtcatgtttgtaaaacaagggacg
tacgtcaacccaaaggagcgccgccgtaatgtccgcgacatgttccccagagacaacgac
gacgccatttcacgtgccatgagcgagccggacctccacgggccagatgtggactactcc
gaaatcagcaccgactcaggtcacgattccctgttcaaccgacccggtctcggcaccatg
gttttcaggaggaactatgtaaccgggggaatgtttgacctcaacgctcgagacgcaacc
agcttggccaactcaggcagtaacgtgcgtttacgcagccggctgcaccagtacccaagt
ctagatgaagacagcattgggagtgcgcacagcctgcaggagaggaacgtggaggagctg
ccttgggaggaagtagaattagggttggacgatgatgatgagcctgacacaagccccctg
gaagtcttccttgctacgcaaagcatgagcgagttttactccatcttcaaaagggagaaa
attgaccttgaagctctgttgctatgctctgatcatgacctcaagagtatccacatcccc
ttaggaccaaggaagaagatcttagatgcctgtaacagacgacttgagaccatggaggag
cctgatggcatcgaggacacagaattgtga
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