Kryptolebias marmoratus (mangrove rivulus): 108241251
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Entry
108241251 CDS
T05608
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108241251
03015 mRNA surveillance pathway
108241251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108241251
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108241251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
108241251
NCBI-ProteinID:
XP_017280761
UniProt:
A0A3Q3A722
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All DBs
Position
LG12:complement(10055235..10058137)
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AA seq
279 aa
AA seq
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MAPSPTKRKEDEKTKDRGKEKTGTKEGEKERGREKVRKRRSASSGSSSSSRSSSSSSSSS
GSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKTQKRGED
KERRKRSPTPKPTKVHLGRLTRNVTKEHIQEIFSTYGKIKMIEMQIDRLHPHLSKGHAYV
EFETPEEAQKALKHMDGGQIDGQEITAAAVLTQRVRPPPRRLSPPRRMPPPPPMWRRSPP
RMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgccaacaaaacggaaggaggatgaaaaaacaaaagatagaggtaaagag
aagactggtaccaaggaaggagaaaaggagagaggacgggagaaagtaaggaaacgtcgc
agcgcctcctctggcagcagcagcagcagcagatccagctcatcatccagcagcagctct
ggttccagctccggttcctcaagtggatccagctcctctggttccagccgctctgggtct
tcgagctctcgatcatcttcctcttccagctcctcgggctctccaagccccagccgcagg
cgtcatgacaaccgcaggcgctcccgctcaccctctaaaacgcagaagaggggagaggac
aaggaacgacggaaacgaagccccacccccaaaccaaccaaggttcacttaggaaggctg
accaggaatgtaaccaaggagcacatccaggagatcttttctacttatgggaaaataaaa
atgattgagatgcagatagataggctccacccacacctgagtaagggccatgcttatgtg
gagtttgagacccccgaggaggctcagaaggccctcaaacacatggatggaggtcagatt
gacggacaggaaatcactgcagctgctgtgctgactcagcgggtccgtcctccacctcgt
agactgtctcctccccgcaggatgcccccgccgccaccaatgtggcgtcgcagcccaccg
cgcatgaggagaaggtctcgctccccaaggagacggtccccggcacgtcgccgctctcgc
tccaggtctcctggtcgcaggcgccaccgctctcgatccagctccaactcatctagataa
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