Kryptolebias marmoratus (mangrove rivulus): 108241271
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Entry
108241271 CDS
T05608
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00310
Lysine degradation
kmr00514
Other types of O-glycan biosynthesis
kmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108241271 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108241271 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
kmr01003
]
108241271 (colgalt1a)
Enzymes [BR:
kmr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
108241271 (colgalt1a)
Glycosyltransferases [BR:
kmr01003
]
O-Glycan biosynthesis
O-linked Gal type
108241271 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
108241271
NCBI-ProteinID:
XP_017280787
UniProt:
A0A3Q3APR1
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Position
LG12:complement(8086598..8092911)
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AA seq
623 aa
AA seq
DB search
MRAPTPVYLRYKASFLATMLEVSVLLLLSACCCPARGYFAEERWSPESPLLAPRVLLALV
CRNSEHSLPYFLGTIERLDYPKDRMALWVATDHNSDNTTVILRDWLLKVQKLYHNVEWRP
KEEPRRYRDEDGPKHWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNVLWK
LMKQNKTIIAPMLESRAAYSNFWCGMTSQGYYKRTPAYIPIRKKVRKGCFAVPMVHSTFL
IDLRKEASRQLAFHPPHPDYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHN
TLQDEADNFLHSLLEVNVRNSAVMPSKYIRVPRKQPDKMGFDEVFMINLERRTDRRERML
TALYEQEIACKVTAAVDGKAMNVSKVHAMGIHMLPGYSDPYHDRPLTKGELGCFLSHYNV
WKEIVERGLQTSLVIEDDLRFDIFFKRRLMNLMSEVENEGLDWDLIYIGRKRMQVDHPEK
AVPRIHNLVEADYSYWTLGYMMSLQGAEKLLKAEPLKKILPVDEFLPIMYNKHPVSDYME
QFENRDLKAFSAEPLLVYPTHYTGDPGYISDTETSTVWDNDKVRTDWDRARSGKTREQAE
ISSEAQNSDVLQSPLDSAVRDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccccgaccccagtttatctacgctataaagcatcatttcttgccacgatgctg
gaggtgtccgtcctcctgctcctgtccgcctgctgctgccctgcccggggatactttgcg
gaggagcgctggagccccgagtctccgctcctcgctccgcgggttctcctcgctctggtt
tgcagaaactccgagcactctctgccgtatttcctgggcactattgagcgcctcgactat
cctaaagaccgtatggctctctgggtagcaactgaccacaacagtgacaacaccacagtg
attctacgtgactggcttttaaaagtgcagaaactttaccataatgtggagtggaggcca
aaagaagaacctagacgttatagggatgaagatggcccgaaacactggacagatctccgt
tatgagcatgttatgaaacttcggcaagtagcactggagtctgctcgtgaaatgtgggca
gactactttatgttggtggactgcgataacctcctcaccaatcccaatgtgctctggaag
ctcatgaaacagaataagactattatcgctccgatgcttgaatcccgagcagcctattca
aatttctggtgtggaatgacttcccagggttactataagaggacacctgcctacataccc
atcaggaagaaagtgcggaagggctgttttgctgttccgatggttcactccacattcctg
atagacctcagaaaagaggcatcgaggcagctggcttttcacccaccacatccagattac
agctgggcttttgatgacattattgtgtttgcgttctctgctcggatggcagatgttcaa
atgtttgtatgtaacaaggagacctatggttactttcctgtgccactgcgctctcacaat
actttacaagatgaagctgacaacttcctgcattccctgttggaagttaatgtacgaaat
tctgcagtgatgccttccaaatacatacgtgttcctagaaaacaacctgacaaaatgggc
tttgatgaggtgttcatgataaacctagagaggcggacagatcgcagagaacgtatgctg
acggccctgtatgagcaggaaatcgcatgtaaggtcactgcagcggtagatggaaaagct
atgaatgtcagtaaagttcatgctatggggatccatatgctccctggatacagcgaccct
taccatgatcgaccactgacaaagggagagctgggctgctttctttcccactataacgtc
tggaaagagattgtagagaggggtctgcagacttctctggtgattgaagatgacctgcgc
tttgacattttcttcaaacgtcgcttgatgaacttgatgagtgaggttgagaatgaagga
cttgattgggatctcatctatattggtcggaagagaatgcaagtggatcatcccgagaaa
gcagtgccacgcatacacaacctagtggaggcagactattcatactggacgctaggttat
atgatgtcattacagggtgctgagaagcttttaaaagcagaacctttaaagaagatttta
ccagtggatgagtttcttcctatcatgtacaataaacatccagtctctgattatatggaa
cagtttgaaaacagggacctgaaggcgttttctgcagagcctctccttgtgtatccaact
cactacacaggcgacccaggctacatcagtgacactgagacctccactgtgtgggacaat
gataaggtccgtacagactgggacagagcacgctcaggaaaaactcgggagcaggcagag
atcagcagtgaggcccaaaactcagatgtgctccagtcccctttggacagtgcagtgcgg
gatgaactttga
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