Kryptolebias marmoratus (mangrove rivulus): 108241344
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Entry
108241344 CDS
T05608
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108241344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108241344
Ion channels [BR:
kmr04040
]
Ligand-gated channels
Serotonin (5-HT3)
108241344
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5868
T6PP_N
DUF5302
Motif
Other DBs
NCBI-GeneID:
108241344
NCBI-ProteinID:
XP_017280905
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Position
LG12:9153392..9157303
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AA seq
415 aa
AA seq
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MKRPAFLLVILFVGCVRAEPNCTERRCLAQMLINKEYYSQPQYENCTLPIEVPFIEYQTL
AVDTKNLRLNSRLVAAVEWLDPALAWDMSVYKFDRVVLPVKKIWTPQLHVTNGITTSMKH
ASDDLVVFSNGRVVHRVIINAEVNCEVNLFNYPFAGDECPVAIQTFSTGDCGTGLRLGDV
RMIDGSHGDWQTDFATLKKQRDDRNYITVGLSIKYSNPFITLLLPSILIVLADLVSFALP
LRGGERNTFKVTLALSFTMFLNILNNELPGDSQCSPIIRTHFCICLILLVLSMLVSMMLT
GVAKDGLLIFNCFSKCSARRDKGNSDENKDEEIKADISVVHLDVSEDIQMLRKVVKFLEA
LDTKKQKHAKYEKIANRGDKIFFWFYFFVASSYITAMTCVMVKYKCKVNHFDFWY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaccggccttcttactggtgatactttttgttgggtgcgtgcgtgctgaaccc
aactgcacggagcgcagatgtctggctcaaatgttaatcaacaaagaatattattctcag
cctcagtatgaaaactgcaccctgccaattgaggtgcccttcatcgagtaccaaactctg
gcagttgacacaaagaatctccgtctcaatagtcgtcttgttgctgcagtcgaatggctc
gatccagctttggcgtgggacatgtccgtttacaagtttgatcgagtggttttgccagta
aaaaaaatctggaccccacagctccacgtaacaaatggaataacgacaagtatgaagcac
gcttctgatgatctggtggtattcagcaacggtagagtggtgcaccgtgtgatcataaat
gcagaggtgaactgtgaagtcaatctgttcaactatcccttcgctggggatgaatgtccg
gttgcaatccaaaccttttcaacaggagattgtggtacaggcctacgtctgggtgatgtg
aggatgattgatggttcccatggagattggcaaaccgatttcgcaaccctcaagaaacaa
cgagatgaccgcaattacatcacggtgggactgagcatcaagtattcaaaccccttcata
acgttattgctgcccagcattctgattgtcttggctgatttggtcagcttcgctctgccg
ctgagaggcggcgagcgcaacacgttcaaggtcactctggcgctcagcttcaccatgttc
ctgaacatcctgaacaacgagctccccggagacagccagtgcagccccatcatccgaact
cacttctgcatttgcctgatcctccttgtgctgagcatgctggtgtccatgatgctgacg
ggggtggccaaagacggcctgcttatttttaactgcttctccaaatgttctgcccgacga
gacaaagggaacagcgacgaaaacaaggatgaagagatcaaagctgacatcagcgtcgtc
cacctggatgtctccgaggacatccaaatgctcagaaaggtggtcaaattcctggaagct
cttgacaccaaaaagcagaaacatgcaaagtatgagaagattgcgaacagaggggataag
atctttttctggttctatttctttgttgcctcctcatatattactgcaatgacttgtgtt
atggtgaagtataaatgcaaagtgaatcacttcgatttctggtactga
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