Kryptolebias marmoratus (mangrove rivulus): 108241354
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Entry
108241354 CDS
T05608
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108241354 (lmx1al)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108241354 (lmx1al)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108241354
NCBI-ProteinID:
XP_017280919
UniProt:
A0A3Q3ARB3
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Position
LG12:complement(8057878..8072953)
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AA seq
410 aa
AA seq
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MLPTEISGGVCFTSSDHTEARREGMKTEENQQSCLQQPPSSTPFGPDYRGGGEVCAGCES
PIADRFLLRVNERSWHETCVKCAVCLSALSGTCYCRDRLLYCKHDYEKLFVRKCSGCLQV
IGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYEKEREMLAAISP
TPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAFKASFEVSAKPCRK
VRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQLGGTRRGPSRGGRQ
SNDDSEDGSSTHGMDGLLGYPSLPRQQLLALDPNIYGGEPFRHGLTPPQLNSEQLHSYDS
ETVFHDLDSDGSLSHLGDCLLATGEGGLLAGRVGNPIDRLYSMQNSYFTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttacccacggagatttcaggaggagtgtgtttcacctcaagcgatcacactgaggca
aggagagaaggaatgaaaacagaggagaaccagcagtcctgtctgcagcagcctccatcc
tccacgccttttggtccagattacagaggagggggagaggtgtgcgcgggctgcgagtct
cccatcgccgaccgcttcctgctgcgcgtgaacgagcgctcctggcacgagacctgcgtc
aaatgcgccgtgtgtttgagcgcgctcagcgggacctgttactgcagggaccgcctgctg
tactgcaagcacgactatgaaaagctctttgtaaggaagtgcagtggctgcctgcaggtc
attggacgctctgagctgataatgcgagtcctaggccaggtgtaccacctgggctgtttc
agctgctgtgagtgtgaacgccgactgcagagaggtgatgagtttgtgctgaaagaaggc
cagctgctctgtcgcatggactatgaaaaggagagggaaatgttagctgctattagtccc
acacctactgaatcagtgaaaagtgaggatgaagatggtggtggaggctctggtggtgga
aaaggtggtgatgaaggcaaggagcacaagcgttcaaaacgtccacgcaccatcctgacc
acacagcagcggcgagctttcaaggcctcctttgaagtatcagctaagccatgccggaag
gtgagggagacactggctgctgagactgggctgacagtacgagttgttcaggtgtggttt
caaaaccaaagagccaagatgaaaaagattgctcgtcgacagcagcagcagcagcagcaa
cagcaggaacaagagcaactgggcgggaccaggagaggaccaagcagagggggccgtcaa
agcaatgatgatagtgaggatgggtctagtactcatggcatggatggcttgctggggtat
ccatctctgccacgtcagcagctccttgctctggaccccaacatctacggaggagagcca
tttcgacatgggcttacaccacctcaactgaacagtgagcaactccactcatatgactcg
gagacagtcttccatgatttggatagcgacggaagcctcagtcaccttggcgactgtctc
ttagcaacaggggaaggtggtctcttagcagggagagtgggaaaccccatcgaccgtctc
tactccatgcagaactcctacttcacctcctga
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