Kryptolebias marmoratus (mangrove rivulus): 108241403
Help
Entry
108241403 CDS
T05608
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04020
Calcium signaling pathway
kmr04080
Neuroactive ligand-receptor interaction
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108241403 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108241403 (grin1a)
04082 Neuroactive ligand signaling
108241403 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108241403 (grin1a)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
Glutamate (ionotropic)
108241403 (grin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108241403
NCBI-ProteinID:
XP_017280993
LinkDB
All DBs
Position
LG14:23745534..23789881
Genome browser
AA seq
947 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANLVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQLDGTCKEEMTLNGVLIKKVICTGPNETIPGRPTVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPK
KKASFRSISTTLASSIKRRRSSKDTQYPPTDATGQLNLSDPSVSTVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttcctgctggcggtgctcctctcgtgctcctgcgcgcgggcgggctgcgag
cccaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtcttcaag
gacgccgtgaaccaggccaacctggtctacggccgcgacaagttcaagctgaccgccatc
tcggtcacgcacaagcccaacgccatccagatggctctgtcggtgtgcgaggacctcatc
tccagccaggtctacgccatcctggtgagtcacccccctcagtccagcgaccacctcacg
cccacgcccgtctcctacaccgcgggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactccgacaagagcatccacctgtccttcctgcggaccgtcccccca
tactcccaccaggcgcacgtctggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtgagcgacgaccacgagggccgggccgcccagaagaggctggagaccctc
ctggaggagcgggaaaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctacagttcagtcaggagacaaac
ttaaccgccctgctgctggaggccaaggagctggaggcccgagtcatcatcctgtccgcc
agcgaggaggacgccgccgccgtgtacaaggccgcccgcttcctgaacatgacgggctcg
ggctacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgatcgccctccagctcatcaacgggaagaacgagtcggctcacatcaacgac
gcggtggccgtggtggcccagtccatccaggagctgttcgagaaggaaaacatcaccgag
ccgccgaggggctgcgtgggcaacaccaacatctggaagaccggacccctcttcaagcgg
gtcctgatgtcctccaaatacccggagggcctcacgggacgcgtcgagttcaacgacgac
ggagacaggaagtacgcgcactacagcatcctgaactaccagaagtcccgcctcgtccag
gtcggcatttacaacggaactcaggtggtgatgaacaatcagcggaagatcatctggcct
ggaggggagaccgagaaaccgcagggcttccagatgtccactcgattaaagatcgtgacg
atccaccaggagccgttcgtctacgtgaagcccactcagctggacggaacgtgcaaggag
gaaatgacgttgaacggagtcctgattaaaaaggttatctgcacggggcccaacgagacc
atcccaggacgcccgacggtgccccagtgttgctacggcttctgcatcgatctcctgatc
aagctcgctatgaccatgaacttcacctacgaggtgcatctggtggctgacgggaagttt
ggaacgcaggagcgggtgaacaacagcaacaagaaggagtggaacggcatgatgggcgag
ctcctgggcggcctggcggacatgattgttgccccactgacgataaacaacgagcgcgct
cagtacatcgagttctccaaaccctttaaatatcaaggactcactattctcgtcaaaaag
gaaatccctcggagcacgctggactcgttcatgcagccgttccagagcacgctgtggctg
ctggtgggtctgtcggtgcacgtggtggcggtgatgctttaccttctagaccggttcagt
ccttttggaagatttaaagtaaacagtgaagaagaagaagaagacgccctcaccttgtcg
tccgctatgtggttctcctggggggtgttgctgaactctggaataggagaaggtgctcca
cgcagcttctcagcgagaatcctgggcatggtgtgggctggctttgccatgatcatcgtg
gcttcctacactgccaacctggctgccttcctggtgttggaccggcccgaggagcgcatc
accggcatcaacgacccgcggctgaggaacccgtcggacaaattcatctacgccacggtg
aagcagagctccgtggacatctacttccggcgacaggtggagcttagcactatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgagaacatggcaggagtcttcatgctggtggccggaggcatc
gcggcagggatcttcctcatctttatcgaaatcgcctacaagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacttgcagccc
tcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaa
aagaaagcctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtagg
tcctccaaagacacgcagtacccgcccaccgacgccacgggccaactcaacctgtctgac
ccgtccgtcagcaccgtggtgtga
DBGET
integrated database retrieval system
