Kryptolebias marmoratus (mangrove rivulus): 108241421
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Entry
108241421 CDS
T05608
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04140
Autophagy - animal
kmr04150
mTOR signaling pathway
kmr04218
Cellular senescence
kmr04910
Insulin signaling pathway
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108241421 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108241421 (tsc1b)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
CCC_C_2nd_pro
DUF7310
Trimer_CC
SulA
Motif
Other DBs
NCBI-GeneID:
108241421
NCBI-ProteinID:
XP_017281038
LinkDB
All DBs
Position
LG14:23528202..23550499
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AA seq
1242 aa
AA seq
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MAREQPNVGDLLPLLETSDLQQLEEIRGLINEQLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNDCLTKQACRLPTLMLLGHVVRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLITLLPMIPQAGKQHLWEYFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKKYEIHDIVIECAKVSLDPKEASCEEGYTTMPENFNPQLHLRPQDCTSSPYT
DLHSSYGSSSSTPFSTPRQPLPPPLSLPPFSGTQPSYRSPQTSRRQNSTCELNSSCAGKD
PLWSPSSLCGMATPPSSRGMSPNLELSHSASHLPGRFHCTSGGKGTPASSTPATSSPPPA
LADDFPVISLSANTVQSSPPRRDRRQGETSKPVLVRQEPVRDMEKNAEGSTSRDAGMAAN
VSMTLNELSVFMKKQELDLQLRTEKEKEEAAITEELLKLTEDKQELSDLRGFDSPFFHTT
ETLTGSQVQDKASSNAHPGAPARETRHSASTPDRAEVSASSSGVGSERGGGAGGDSRSSA
LEQSWSYQSGFTPIEHHLHRCPSAPDDEASKFGMLSPSPCGKTPAPVPYESFFDLALPRA
ASLFVGQKTSEAFHKATMERLLQREEGLEDGEEEGVVSASPLEVLDRLVQQGSDAHDKVL
KRLPLPSKSADWTHFGGSAPLDELHTLRSQLFLLHNQLLYERYKREQHAVRNRRLLRRII
NATALEEQNNAMKDQLNLQSVDIVSLRESLHVEQQRYRQLWDDRETVVTRLHSQIRQLQQ
SRDDYYTKNQELQSKLQECQKRMDELEAELQRANNKVGHTGHLLNQMTVKLSNSESTQQQ
MSFLNKQLLLLGEAHKLSAQELQLAGTRNTKEAQMLQASHAKEVEALRQSLVLQGQKLEA
AQQRAAELETHLSKKEHLIAEQKKFLEDVKCQARAELQASDGRYRAQRRIAQLLQTELLQ
LYSRVEMEAPGGPGRSRSSPPEGRADTHTPADFSVVTSDGPSRVHPREEAGSRSPRGSPR
GNGSTLTSGQPKASNSSSSMNGGQDLTPPPLLVEPARSCPHANPLASLPASDAPLTVGSY
PSAKSFLGMKARELFRNKSESQCDEEQPPPQQQTPPPRLAGLAHDLKTELCVEPPADPVD
PGREQRVHGPGSPRRKAGAAPGRPRQQQLKIMDYNETHHEHS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggccagggagcagcccaacgtgggggacctcctcccgctcctggagacctccgacctc
cagcagctcgaagagatccgaggccttatcaacgagcagctcagcaccgagcgaggctcc
atgttgctgaacgggctggtggattactttttggaaaccaactccgcccaggccatgcat
atcctctcttctgtcagagagccacacgataagcaccttctagacaagatgaacgactgt
ttgaccaaacaggcctgccggctgcccaccctcatgctcctcggccatgtagtccgcaag
cagccgtcctggatccacaagatcgcccgttaccctctgctgctctctctgctcaaatgc
ctcaagacggacacagatgtagtcgtcctcataaccggagtgctggtgctgatcactctg
ctgccgatgatccctcaagctgggaagcaacacctgtgggagtattttgatatttttggc
cgtctggcatcgtggaaccttaagaatccaggccacgtttcggaggtttacctaatccac
ctgcacgccagcgtttactcgctcttccaccggctttacggcatgtacccgtgtaacttc
gtgtcctatctgcgctcccattacagcatgaaggagaacatggaaaccttcgaggaggtg
gtgaagccgatgctcgaacacgtccgtatacaccctgagctggtgacaggaaccaaggac
cacgagctcgacccgaccaggtggaaaaagtacgagatccacgatatcgtcattgaatgt
gccaaagtgtccctagaccccaaggaggcctcctgcgaggagggctacaccaccatgcct
gagaacttcaacccccagctgcacctgcggccgcaagactgcacctcgagcccgtacaca
gacctccacagcagctacggaagctcctcgtcgaccccgttctccacgccgcggcagccg
ctgcccccgcccctgtccttgccccccttctcagggacacagccctcgtaccgcagccca
cagacctccagacggcagaactccacctgtgaactgaactcttcctgcgcggggaaggac
cctctgtggagcccctcctctttgtgcggcatggccacacccccttcctcgaggggcatg
tcgcccaacttggagctctcccacagtgcctcacaccttccgggccgcttccactgcaca
tcgggcgggaaaggaacgccggcttccagcactcccgccacctcctccccacctcctgct
ctggcggacgacttccctgtcatctccttatcagccaacacagtccagtccagtcctcca
agaagagatcgccggcaaggagagaccagcaaacctgtgctggtgagacaggaaccagtc
agagacatggagaagaacgcagaggggtccaccagccgagacgcagggatggcggcaaac
gtgtccatgacgctgaacgagctgtccgtcttcatgaagaagcaggagctggaccttcag
ctgaggacagaaaaggagaaagaagaagccgccatcacagaggagctgctgaaactcacc
gaagacaagcaggagctgtcggacctgcggggcttcgactcgccgttctttcacaccacc
gagactctgaccggcagtcaggtgcaggacaaggcctcctccaacgcccaccccggagcg
cccgcccgagaaacccgccactcggcgtccacgccggacagagctgaggtctccgcgagc
agcagtggcgtcggcagcgaaaggggaggaggcgcgggaggagacagcaggagctccgcc
ctcgagcagtcctggtcctaccagtccggcttcacccccatcgagcaccacctgcacagg
tgcccctcggcgcccgatgacgaggcgagcaagttcgggatgctgtcgcccagcccgtgc
ggcaagaccccggcgccggtgccctacgagtcattcttcgacctggccctgccgagggcc
gcctcgcttttcgtgggccagaagacgtcggaggcgttccacaaggcgacgatggagagg
ctgctgcagcgggaggaggggctggaggacggcgaggaggagggggtcgtgtctgcgtcg
ccgctggaggtgctggatcgccttgttcagcaggggagtgacgcccacgacaaagtcctc
aaaagattacctttgccaagtaagtcagctgactggacacattttggaggctcagctcct
ctggacgagctgcacacgctgcgcagccagctgttcctgctgcacaaccagctgctgtac
gagcgctacaagagggagcagcacgccgtccgcaaccgccgcctccttcgacgcatcatc
aacgccaccgcgctggaggagcagaacaacgccatgaaggaccagctgaacctgcagagc
gtggacatcgtgtctctgagggagagcctgcacgtggagcagcagcgctaccggcagctg
tgggacgaccgcgagacagtggtgaccaggctgcacagccagatcagacagctgcagcag
agccgggacgactactacaccaagaaccaggagctccagagcaagttgcaggagtgtcag
aagaggatggatgagctggaggcggagcttcagagagccaacaataaagtcggacacacc
ggccacctcctcaaccagatgaccgtcaagctgagcaacagcgagagcacccagcagcag
atgagcttcctgaacaagcagctgctgctcctcggggaggcgcataagctgtccgcgcag
gagttgcagctcgccggaaccaggaacaccaaggaagctcagatgctgcaggcgtcccac
gccaaggaggtggaggcgctgcggcagagcctggtgcttcagggccagaagctggaggcg
gcgcagcagagggcggccgagctggagacccacctctccaagaaggagcacctcatcgcc
gagcagaagaagttcctcgaggacgtcaaatgtcaagcaagggcggagctgcaggcgtca
gacggcaggtatcgagctcagaggaggatcgctcagctgctgcagaccgagctcctgcag
ctctacagccgggtggagatggaggctccgggcggccccggcaggagcaggagttcacct
ccagagggcagagccgacacacacactcctgcagacttcagtgtcgtcacgtcagatgga
ccaagtagagttcacccccgcgaggaggcgggcagcaggtcgcctcgcggttcccctcgg
ggcaacggcagcactttaacatcagggcaaccaaaggcgagcaactcttccagctccatg
aacggaggtcaggacctgaccccgccgccgctgctggtggagcccgcccgctcctgtccc
cacgccaacccgctcgcgtccctgccggcgtcggacgcgccgctcaccgtgggctcctac
cccagcgccaagagcttcctgggcatgaaggcccgcgagctgttccgcaacaagagcgag
agccagtgcgacgaagagcagccgccgccgcagcagcagacgccgccgccgcgcctggcc
ggcctcgcccacgacctgaagactgagctgtgcgtggagccgcccgccgaccccgtcgac
cccggcagggagcagcgggtccatggcccgggaagcccccgcaggaaggccggggcggcg
ccgggccgccctcgacagcagcagctgaagattatggactacaacgaaacgcatcacgag
cacagttag
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