Kryptolebias marmoratus (mangrove rivulus): 108241442
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Entry
108241442 CDS
T05608
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108241442 (samd1b)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
108241442 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF4777
Motif
Other DBs
NCBI-GeneID:
108241442
NCBI-ProteinID:
XP_017281075
UniProt:
A0A3Q3B7Z5
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All DBs
Position
LG3:complement(22532871..22545508)
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AA seq
641 aa
AA seq
DB search
MSEPNKYREWILETIDSLRLRKARPDLDRICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKRSEFTAAGGGGGGGADAPRERSKHLNNNGDSAHSFTDQE
EGEEDSEPSPDPSTQTSACSPSKKPKPASSPSSGNGCPSCGATTSCAAGSGCREEKASAP
RDKGLGQQGQQGQQGAGGSPSAGAHGTVTPSKAEAAGGGKKPDLSGADTQNQTSSGSAGS
PPQHQAQRDAVSPKTKLRLAGASGRKSDLGDKLVASVRSLSERSFRGGSAAARGHMMKPL
GLKEILGYLSSQERLSEEKLTRGKVKVVMEREVARGRLRRTRCGNITLPLRGMVLEETAP
KPPAADRLEKSALQDKQAAKKPPSPPLQQSGPMETASEEEEEDDPRSSDQEGGLPAVAMT
TEPGLIDSTREDAAIQGAREEESPQQPKEDGEVAGSSAALGLDFLPESQAPPPAEGASLP
QPNGAHLEKKVITSDHLTTEAQSHTRRDETEPTSSSLDDLECKTEVGVSSCMLTPTASPR
DCSLSEERGVNDSSAGDLKSEGVGGSPVDWTVSDVVSYFTAAGFPEQAAAFRVQEIDGKS
LLLMQRNDVLTGLSIKLGPALKIYERHVKVLQKTHFEDDDC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgggagtggatcctggaaactatcgactctctccgtttg
aggaaagcccgtccggacctggataggatttgtcgaatggtccggagacgacacgggtcg
gacccggaccgaaccaggacggagctggagaaactcatccaagagcagacggtgctcaaa
gttagctacaaggggtccatctcgtaccggaacgcggccaaggtgcagaggaaaagccga
aagaggagtgagttcacggccgctggcggcggcggcggcggcggcgcggatgcaccgagg
gagcggagcaaacatctgaacaacaacggcgacagcgcgcacagcttcaccgaccaggag
gagggcgaggaggactcggagcccagcccagatccgagcactcaaacatcagcctgcagc
cccagcaagaagccgaagcctgcctccagcccgagtagcggaaacgggtgcccgagctgt
ggcgcaacaacgagctgcgccgccgggagcggctgtagagaggagaaagcaagtgcaccg
agagacaagggattaggacagcagggacaacagggacagcagggagcggggggcagcccg
tcggccggcgcgcacggcaccgtgacgccgagcaaagccgaggcggctggcggcggaaag
aagcccgacttgtccggagctgacacccagaaccaaacttcctctgggagcgccggcagc
ccccctcagcaccaggcgcagagggacgcggtctcccccaagaccaaacttcgactggcg
ggagcaagcggccgaaagtccgacttgggcgacaagctggtggcttccgttcgcagcctg
tcggagaggagcttccgggggggctccgccgccgccagaggccacatgatgaagccgctg
ggtctgaaggagatcctgggctacctgagcagccaggagcggctgtcggaggagaagctg
acccgaggcaaagtcaaggtggtcatggagcgagaggtggcgaggggcaggctgcgcagg
acgcgctgcgggaacatcactctccccctgagggggatggtgctggaggagaccgcgccg
aaacctccggccgccgacagacttgagaaaagcgcactgcaggacaaacaggctgcgaaa
aagcctccttcgccacctctccagcagagcgggccaatggaaaccgccagcgaggaagag
gaagaagacgatccccggagttctgatcaggaaggaggactacccgctgtagccatgaca
accgaaccggggctcattgatagcacaagagaagatgctgcgatccagggagcgcgggag
gaggagagcccccaacagccgaaggaggatggtgaagtcgccggctcctcggcggcgctg
gggcttgattttctcccagaatctcaggctcctcctcctgctgagggagcctcgctgccg
cagcctaatggtgcacacttggagaagaaggtgattacctctgatcacttaaccacagag
gcacaaagtcacacgcggcgtgacgaaacagagcccacgtcctcgagcctcgacgacttg
gagtgtaagacagaggtcggcgtgtcttcctgcatgctcacgcccaccgcgtccccgaga
gactgcagcctgtccgaggagcgaggcgttaacgacagcagcgcaggagatctgaagtcc
gaaggcgtgggagggagcccggtggactggaccgtgtctgatgtggtcagttatttcaca
gctgcaggttttcctgagcaggccgctgccttcagggtgcaggaaatcgatgggaagtct
ctcctcctcatgcagcgtaatgacgttttgaccggcctgtcgatcaaacttggccccgcc
ctcaagatctatgagcgccacgtgaaggttctgcagaaaacacacttcgaggacgatgac
tgctaa
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