Kryptolebias marmoratus (mangrove rivulus): 108241572
Help
Entry
108241572 CDS
T05608
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108241572 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108241572 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108241572 (nup153)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108241572 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
108241572
NCBI-ProteinID:
XP_017281331
UniProt:
A0A3Q3F4A6
LinkDB
All DBs
Position
LG5:10402419..10418140
Genome browser
AA seq
1516 aa
AA seq
DB search
MTAIRRRNIDRHSDERAMAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVP
SWLQKYFKNGDAAEGGEAGQGLDQNCQPPLLPPPPPPPNGSEEGPPPLDGRDSPEPSTSN
TEPSTSRASLNFQDYVLSRPPLSRSHLHLTPLDASSPILGASSSLFSQPSTSSAPGPFST
GFSLVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTISGPQP
SQSSLKKPSFNLSVFGNSSNSTLNSTMLNSSQLGDSPFYPGKTTYGGASAVRSSRNRPGT
PYQAPVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAASPNLSPSVD
GTNLDVSDHPSKKKRMDSSLPPVQKLVIPAAASVSGSRAVSFRPTLTPGGFSRTLDRTTR
EKTPSRQSPQLPKATPGPSQSTRSYSDPTYPLSSTPAPSSMSSGGGKIKRERTTARPSSK
RPEDDEVVEVPALPSISLPISTSSLPTFSFSLLPPSSTSVSSTPSASAVTPAKETVTNKD
PPKASTPPCVPFTFSSPIVKATAASPPSYSPSTGFTFSAPVAKLGPSMSNGKLMAPTAAV
KPVTSKSTEEFEGPFKPAKTLKQGSVLDLLKSPGFASPVAQSSSGTSASPQQKSTQSTAP
LLTGTSSSSSLPSSAGFSGLFKASTGWSCDVCLVQNKQSDTKCVCCMAPKPNSPPKSVES
KPLPSNSVGLESSSTSTTSTSVTTKGFGPIFSKPAGTWDCDTCLVSNKPDAVKCVACETA
KPGTGLKPSLTFPSAFSSVKTSSTPTDPVSTGISGFGDKFKKPEGAWECETCLVQNKAED
TKCVACTAAKPGASAEAASSTSSAQVFGLGDKFKKPEGSWECDICLVQNKAADAQCVACQ
AAKPGAKVEPKAFGSFSTSAGGTTGTSTIGSSTSTSGGFKFGTSDSTSGSGGFKFGTTES
SSTSSSSSGGFKFGSSSSESSSKDTTASSGFKFGTSSEGFKFGAASNDDKKLEQPAAPSA
FKFGVGGVTTFGFGSSSTEGFTFGQSKPVEKTPETTTASSSSVSFTPLFSSQEKSDTEES
SNSITSTNTNPTTTTTVTTGSVFARLGEPSLATSTPKVSSTFGSLPPAKEPAAPTFTFGN
PEEKKETSSTPAPSGFIFGAASKDADSAVAPAATGGFTFGKPSAPTEQPPPAFTFGKPAE
TSETTTSETPKPTFTFGQSAADSTAAGPKSAFSFLVNNPANTTNSTTPSTTTPSLFGTTS
SSTSTPAPASSAAPGTFVFGQPSATTSDAAPAKTFVFGQNQDSQSSAPSSAPLNSAPAPA
QPFIFGAAAAPTAPAAPSFSFGATAPSAASSSAPSAASSPFVFSSAPSGGFGANQTSSFG
SSFGSPFPATASQTPAFGAKPNAAPIFGQQTNSTPVFGAAANSASGGGFQFGGASAFAAT
NNTNTGVFTFGAGSGASPAPASNPSMAPPSGAAGGGFNFSQPPTFNIGAVKSFTASPAGP
SPIAGRKIKTAVRRRK
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacatcgatagacattcagacgaaagagctatggcggcc
acgggtggagggaaaattagaagcaggagatatcatattgcttctaaaccttacgccaag
agcaaacagcagtcaggcctcatcagtcgagtgaccgacacggtaaagagcatcgttcct
tcctggttgcagaaatactttaagaatggagatgctgctgaaggaggagaggcagggcaa
gggttagaccagaactgccagccgccgctcctaccacctcctcctcctccccctaatggc
agtgaagagggacctcctcccctcgatggacgagattcccccgagccgagcaccagtaac
acagaaccttcaactagtcgtgcgtccctgaacttccaggactacgtgctttctcgccct
ccgctgagtcgctcccacctccaccttaccccactggatgcctcctccccgatcttggga
gcctccagcagcctcttctcccagccctccacctcctcagcccccggccccttctccaca
ggcttctctttggtcaaagaaatcaaggacaacctctcacagcacgaagacgataacatt
tccaccacgagtgggttctcctcccgtgcgtctgacaaggatgtccccacttccaaaacc
gcgtcccttcctcagctttggtccccggaaatggacagaacaatctctggacctcagcct
tctcagtccagtttgaaaaagccctccttcaacctgtcagtctttggaaactcctccaac
tcaacattgaacagcacaatgctgaactcaagccagcttggtgattcacccttctatcct
gggaaaaccacgtatggcggagcatctgcagtcaggagctcccgcaatcgtcctggaacg
ccttatcaggccccggtgagaagacagatcaaggccaagcctgctggagctcagccctgt
ggtgtgaccagcgccaccgccaggcgcatcctgcagtccttggagcgcatgtcgagcccg
ctggctgatgcaaagagaatcccagcagcagcttcccccaacctgtcaccttcagtggat
ggcacaaatcttgacgtttcggatcacccgtccaaaaagaaacggatggactcgagtctc
ccacctgtgcagaaactggtgattccagcagcagcttctgtttcaggaagtcgtgccgtg
tctttcaggccgactttgactcctggaggattcagccgaactctggaccggaccacaagg
gagaagacgccgtcaagacaatcacctcaactacctaaagcaaccccaggtccatctcaa
agcacaaggagttacagcgaccccacctaccctctgtccagcaccccggcgcccagcagc
atgagctctggcggcggcaaaatcaaaagagaacggaccacggcacggccctcctccaaa
cgccccgaagatgacgaggtggttgaggtaccagccctcccaagcatttccctccccatc
agcacatcatccttacctacattcagcttctctttgttgccgccttcctccacctctgtt
agttccaccccctctgcctcagctgttactccagctaaggaaaccgtcacaaataaggat
ccaccaaaggcctcgacaccaccctgcgtaccttttacattttcctcccctatcgtcaaa
gccactgctgccagcccaccttcctattccccttctactggatttacgttcagtgcacct
gtagcaaagttgggtccttccatgtcaaacggaaagcttatggcacccacagcagcagtg
aagccagtcacaagcaagagcacagaagaatttgaaggaccttttaaaccagccaagact
ctgaagcagggcagcgtgctggatcttctcaaatcacctggttttgcctctcctgttgct
cagagctcctcaggcaccagcgcttctccccagcaaaaatcaacacaatccacagccccc
ctattaactggcacaagctcttcctcctcccttccttcatcagcggggttcagtggtttg
tttaaagcctctacgggttggagctgcgacgtgtgcttggttcagaacaagcagtcagac
acaaagtgcgtttgttgtatggccccgaagcctaattccccacctaaatctgtggagagt
aaaccgttgccttccaactctgtggggctggagagcagcagcacaagcaccacctccacc
tccgtaaccacaaaaggttttggtccgatattttctaaacccgcagggacctgggactgc
gatacgtgtctggtttcaaacaagcccgatgccgtgaagtgtgtcgcctgcgaaacagcc
aaaccggggacggggctcaaaccctcgcttacgtttccctctgccttctcatctgttaag
acttcatctacgcccacagaccctgtgtccacaggcatcagtgggtttggagataaattc
aaaaaacctgagggtgcatgggaatgtgaaacgtgtttggtacagaacaaggcggaggac
actaaatgtgtggcctgcacggctgctaaaccaggagcttcagcagaagcggcttcctcg
accagcagtgcccaagtgtttggattgggagacaagttcaagaaaccagaaggatcctgg
gagtgtgacatctgtctggtgcagaataaggctgctgatgctcaatgtgttgcctgtcag
gcagccaaacctggagctaaagtggagcccaaagcttttggctctttttccacctctgct
ggtggaacgactggaacatcaaccataggctcttctacctctacctccggaggttttaag
tttggcacatcagacagtacatctgggtctggaggtttcaaatttgggactacagagtcg
tcgtcgacgtcttcttcttcttcaggtggatttaaatttggaagctcctcatcagaatcc
tcttctaaagacactactgcctcatcagggtttaaatttggcacctcctctgagggcttt
aagtttggggctgcctctaatgacgacaaaaaattggagcagcccgctgcaccttctgcg
ttcaagtttggagtcggcggtgtgacaacctttggatttggatcatctagcacagaaggc
ttcacctttggacagtcgaagcctgtggaaaagacaccagaaaccaccacagcctcttca
tcctctgtttcttttactcctcttttttcctcacaagaaaagagtgacactgaagaatct
tcaaatagcatcacgtcaacgaacaccaacccaaccaccaccaccaccgtcacgacgggg
tctgtatttgcgagactgggcgagccgagtttggcgaccagcacgccaaaagtgagctcc
accttcgggtctttaccgccggcgaaggagccggctgctccgacgtttacctttgggaac
ccagaggaaaagaaggaaacgtcctctaccccagctccatcgggcttcatcttcggtgcc
gctagtaaggatgcagattctgcggttgcacctgctgctacgggaggcttcacttttggc
aaaccaagtgctccaacagaacaacctccaccagcttttacttttggaaaacctgcagaa
acaagcgaaacaaccacttcagagaccccaaagcctacattcacttttggacaaagtgct
gcagattctactgctgctggtccaaaatcagcatttagcttcttggttaacaatcctgcc
aacaccaccaactccaccaccccgtcgaccacgactcccagtttgttcggcaccaccagc
agcagcacctccacgccagctccagcatcctctgcagctcccggcacttttgtcttcggc
cagccttctgcaaccaccagtgacgctgctcccgccaaaaccttcgtctttgggcagaac
caggacagccagtcctcagctccatcaagtgctcctctgaattcagccccggcgccagct
cagcccttcatctttggtgctgctgctgctcccactgctcctgctgcaccctcttttagt
tttggagcaacagcgccctctgctgcctcctcatcagctccatctgcagcttcctccccg
tttgtgttcagttcagccccctctggtggttttggggccaaccagacttcttcatttggt
tcatcttttggatcccccttcccagccacagcttcccagacccccgcgtttggagccaaa
cccaacgccgcccccatttttggacaacaaaccaactccacgcccgtatttggagctgct
gctaattctgcatcaggtggaggctttcagtttggaggagcgagtgcatttgcagccaca
aataacaccaatactggtgtttttacttttggagcaggatctggagcctctcctgccccc
gcctccaatccctccatggcgcccccgtcaggagcagctggtggtggattcaactttagt
caacccccaacatttaacataggggcggttaaatccttcactgcctctccagctggaccg
tcaccgatcgccggacgtaagatcaagacagcggttcggcgcagaaagtag
DBGET
integrated database retrieval system
