Kryptolebias marmoratus (mangrove rivulus): 108241575
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Entry
108241575 CDS
T05608
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108241575 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108241575 (fip1l1b)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108241575 (fip1l1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108241575
NCBI-ProteinID:
XP_017281333
UniProt:
A0A3Q3BHN2
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Position
LG3:complement(6907714..6917714)
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AA seq
541 aa
AA seq
DB search
MSAEEADKTTTTDASAGDEEEEWLYGDESESKEEDEEAKLNAAVSAPADMSTDEAAVDPA
QTTGNGVASEATGEAAGEDGDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIK
STSSRPYGQVTTKLKGVDLDAPGNINGVPVVEVDMESFEEKPWRKPGADLSDYFNYGFNE
DTWKAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDMSSLSVHTSKADFTSPVSL
YKPAISQVARKQSGTIDVIGVQTATISRVEGRRRHNLEGNNIQVISEHSTTEAEPAPAKI
PAFFPPGPLPPNIPPPPFLPPLPNVSTAPPLIPPPRLPITVPPPGFPPPTSGPPPSLLPT
MDSSHAGVYNDRPVPPYAFPQGAYPPPIPGSVPPPWAAIVDNAKPWEYYPRREDKRDKDR
DRPRERPHERERDREHSPSAMNYNSDEERYRYRDYQERGYVERHRDRSSREKEERHRERR
HREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASDDIGADQENQEAM
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaggcggataaaacaaccaccactgatgccagcgccggcgatgaggag
gaggaatggctctacggagatgagtcagaaagtaaagaagaggatgaagaggccaaactg
aacgctgcagtcagtgcacctgctgatatgtcaacagatgaggctgctgttgatcctgca
cagaccacgggaaatggagtggcctctgaggccacgggtgaagctgctggtgaggatggg
gacagtgacagcgacagtgatgatgacgacgatgatgtccgtgttaccattggcgacatc
aaaactggagcgccacaatacacgacatatggagctccacctgtaaacctgaacataaag
tcaaccagctccagaccatatggacaagtgaccacaaagctgaagggagtggatctggat
gctcctggaaacataaatggtgttcctgtggtggaggtggacatggagtccttcgaagag
aaaccctggaggaagccaggtgcggatctgtcggattatttcaactatggctttaatgaa
gacacttggaaagcttattgtgagaaacagaagaggctgcgaatgggcctggaggtctcc
acagtcggctcagtgaccagcaagatcacagtgcagcagggcaggacaggtaatgagaag
gacatgtccagtttgtccgttcacacatccaaggcagacttcacctctcctgtcagcctg
tacaagccagcgatcagtcaggtcgccaggaaacagagtggaaccatagacgtgatcggc
gtacagacggccacaatcagcagggtggagggccggcgccgacacaatctggagggcaac
aacatccaggtgatttccgagcactcgacgacagaggctgaaccagctccagctaagatt
cctgccttcttcccgcccggaccccttcctccaaacatccccccacctccgtttctgcct
ccgctgccaaacgtcagcactgcacctcccctcatacctccaccaaggttgcccattact
gtccctcctcctggtttccctcctccaacaagcggccctcctccttctttactccccact
atggacagcagccacgctggagtctacaatgaccgccctgtccctccgtacgcatttccc
caaggtgcttacccgccgcccatccctggaagcgttcctcctccttgggccgccattgtg
gacaacgccaagccgtgggagtactatccccgtcgagaggacaagagagacaaggacaga
gacagacccagagagaggccacatgagcgggagcgagacagagaacacagcccttcagct
atgaactacaacagtgatgaggagcgctatcgttaccgcgactatcaggagcgtgggtac
gtggagcgccaccgcgaccggtcaagccgagagaaagaggaacgacacagagagaggcgg
caccgagagaaggaggagggacgccacaagtcctcccgcagtagcagtagtcgaaggaga
cacgacagcgaggagggcgacagccaccggaggcacaaacacaagaagagcaagaggagc
aaggagggcaaagaggccagcgacgatatcggtgcagaccaggagaaccaggaggccatg
gagtag
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