Kryptolebias marmoratus (mangrove rivulus): 108241580
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Entry
108241580 CDS
T05608
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
108241580
NCBI-ProteinID:
XP_017281344
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Position
LG5:11511253..11536763
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AA seq
1166 aa
AA seq
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MSSVCVLKRKAVLWQDSFSPHHRSTSPIMPVVLSSGGHAPPTGQTPQATPPIQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEVS
NQLLTGKKFWETDDSGKDAPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEV
GVGSVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKTTF
EGEKLKELTESESDVISDVINPNGLPVQNGLDVDVKEFGRPSGNMPAPGPEGDLLGGPGG
VGAEGLTPLVGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSTPTVGLF
DYTNQQQLFQRNNALAVQQLTAAQQQQYALAAAQQPHIGLAPAFVPNPYIISAAPPGTDP
YAAGLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANSSANQQAAGQGQQNQQQV
MRAGGNQRPLTPSQSQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDPTG
ALVVNTGARSGPVRLMAPASVIMSPSAAQAVAAAAASAGGANGGLGGGANGPFRAMTSQQ
PQQQGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSAQPGPGSASLGFSQPTSSSLGATL
GATLGGFGTAVANSSGGSGSRRDSLTGNNELYKRTPSSLTPIGHGGFYNGTLGFSPSPGP
VGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSAASSGS
SLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHG
SRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIR
GHVLSLALQMYGCRVIQKALEFIPSDQQVISDMVRELDGHVLKCVKDQNGNHVVQKCIEC
VQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQ
YGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERALLIDE
VCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIQTLRKYTYGKHI
LAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccatcatgcctgtggtgctgagcagcggaggacatgccccc
ccaactggacagacccctcaggccacacccccgatccagcagggtgtggcgggcgcggga
cggtcccaggacgatgccatggtggattatttcttccagcggcagcacggggagcagccc
ggcaagcaccgctggcccactggggacaacatccacgacagtcaggttcggtccatggac
gagctgaaccatgacttccaggctctggctctggagggacgagctatgggagaggtgagc
aatcagctcctaactgggaagaagttctgggaaacggatgattccgggaaagacgcacca
aaagggatcttcttggaccagtggcgggacagtgcatggggggcctcagatcactccgtg
tctcagccaatcatggtgtcccgtcggccggggcaggggttccacggcggaggtgaagtc
ggggtgggctcagtgatgtcaccgcggtccgagagcggcgggctgggagtgagcatggtg
gagtacgtcctgtcgtcctcgccggctgacaaactggattcctgccttcgaaaaggacca
tatggacagagggatggagaggtggaggaagagaagagggagaagccgaagacgacgttt
gagggggagaagctaaaagagttgacggaaagcgaatcggacgtgatcagcgacgtcatc
aacccaaacgggctgcccgtacagaacggcctcgacgtcgacgtcaaggagtttggccgt
ccctcaggcaacatgcccgcccccggccctgagggcgacctgctgggaggtcccggcggc
gtcggggccgaaggcttgacgcccctcgtaggcggcggaggtcccaaacctcctgaggac
ttctctggcgtggagcaaggtggagtcaccatggaccccatggaatcagtaatggagccg
cttcagtttgattacaactctcagatgcccatggactcgacacccactgtgggtttattt
gattacactaaccagcagcagctgtttcagagaaacaacgccctcgccgtgcagcagcta
acagcagcccagcagcagcagtacgccctggcagcggcgcagcagcctcacatcggtctg
gccccagctttcgtgcccaatccttacatcatcagcgctgccccgccggggacggacccg
tacgcagccggactcgcagcggcggccacacttggccctgcagtgatgcctccccagtac
tacggtgtgaccccctggggggtctacccagccaaccttttccagcagcaggccgctgca
gccaacagttcagccaatcagcaagcagcaggacagggccagcagaaccagcagcaggtg
atgcgtgctggaggaaaccagcgtcctttgacccccagccagagtcagcagggtcagcag
aatgaccagctggttgcagcagcagcagtaaactcagccctcgcctttggccaagggtta
gcagcaggcgttcccgggtacccggtcttggcgcctgcagcctattatgatcccacaggg
gccttggtggtcaacacaggggccaggagtggccccgttcgccttatggcccccgcctct
gtcatcatgtctccctctgcagcacaagcagttgcagcagcagcagcctctgcaggtggt
gccaacggtggtttgggcggaggagccaacggcccgttccgtgccatgacatcccagcag
ccccagcagcaggggggcccgggcggtgctctcgggggaagctctttctacgggtcatcg
tccctcagctcatcctcccagagctcttctctgttctcacaaggctcagctcagcctgga
cccgggtctgcctcactgggcttcagccaacccacctcctcctctctcggtgccactctc
ggagccacgctggggggcttcggcacagcagtggccaactcgagtggcggcagcggctcc
aggcgggactccctgacaggcaacaacgagctgtacaagcgcacgccctccagtctcact
cccatcggccatggcggtttctataacggcaccctgggcttcagtccatccccgggcccc
gtgggaatgcccctccccaaccaggggccgtcccattccctcacacccccaccgtccctg
tccaaccacagctcctcgtccaacctcaaccttggaggcctgaccaacggcagcggccgc
ttcatctccgcagctccgggcgccgaggccaagtaccgcagcgcggcgagctcgggctcc
tccctcttctcgcccagcagccagctgttcccgtcatcgcggctacgctacggcatgtcc
gacgtgatgccttcgggccgcagccgcctgctggaggacttcaggaacaaccgctacccc
aacctgcagctgcgagacatcgccggtcacatcatggagttcagtcaggaccagcacggc
agcaggttcatccagttgaaattggagcgagcgagttcagcagagcgccagctcgtcttc
agtgagatcctgcaggcagcctatcagctcatggtggatgtttttggaaactacgtcatc
cagaagttcttcgagtttggcagcttggaccagaagctggctctggctgaaagaatccga
ggtcatgtgctgtctctggccctgcagatgtatggctgcagggtcatccagaaagctctg
gagttcatcccctcagatcagcaggtcattagtgacatggtgcgggagctggacggccat
gtgctgaagtgcgtgaaggaccagaacgggaaccacgtggtgcagaagtgtatcgaatgt
gtccagccccacgcgctgcacttcatcatcgaagcctttaagggacaggtgttcgccctc
tccactcacccgtacggctgccgagtcatccagcgcattctcgaacactgccttcctgaa
cagacgctgcctattctggaggagcttcatcaacacacggagcagctagtgcaggaccag
tatggaaactacgtgatccagcacgttttggagcacggccgagccgaggataagagtaaa
atcgtggctgaaataagaggcaacgtgctggggctcagccagcacaagtttgccagcaac
gtggtggagaagtgcgtgacccacgcgtcgcgggcggagcgcgctctgctgatcgacgaa
gtgtgcagcctgaccgagggcccccacagtgccttatacaccatgatgaaggaccagtat
gccaactacgtggtacagaagatgatcgacgtggccgagcccacgcagcgcaaaatcgta
atgcataagatccggccccacatccagactctgaggaagtacacgtacgggaagcacatc
ctcgccaagctggagaagtactacatgaagaatggcgtggatctgggtcctctctgcggc
cctcctaacggcatcatgtaa
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integrated database retrieval system
