Kryptolebias marmoratus (mangrove rivulus): 108241600
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Entry
108241600 CDS
T05608
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108241600
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108241600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_31
HTH_26
DUF494
HTH_24
CUT
HTH_37
Motif
Other DBs
NCBI-GeneID:
108241600
NCBI-ProteinID:
XP_017281367
LinkDB
All DBs
Position
LG15:complement(18449502..18467091)
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AA seq
514 aa
AA seq
DB search
MFQQSEEPRFTIEQIDLLQRLRRTGISQAEVLHALNTLDHLDRQHGHKLTHKASYMPPLS
SLSSSNAVSASSTMTSTATQTGFPDNQLSLSPGNNFESTSPPLQVSTASPVAVAAVVPNG
LVAVTNGKLSPPRFPLGMVSGSVTAPGYGFEASEEDIDLDDKVEDLMRRDSAVIKEEIKS
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAMR
AAPLALEEVMEWHQTPPPFSPAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKRE
EIATACNGVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSP
GGQSNSDEVDGNDFPDQGCEVSLFDKRASTRQFAFSRADLSSPTQVPPQLPSWFSALARG
GVSGQRGASLIARSLVSGLGSQAEGSRLTGASWSPPSPSLQDEPSLPSALSEPQEPVSSE
KTAVNHSGLASADQVDGARGSAGNRIKTETLEDD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagagtgaggagcctcgcttcaccattgagcagattgatctcctccaaagg
cttcggcggacgggtatttcccaggcggaggtcctccatgccctcaatacccttgaccac
ttggaccggcagcatggacacaagttgacccataaagcttcctacatgccacccttgtct
tccttgtcttcttccaacgccgtctctgcctcctccaccatgacttccaccgcaacgcag
acgggtttccctgacaaccaactctctctgtcccccggtaacaactttgagtccacttcg
ccgcccctgcaggtttcaacagcctcgccggtcgcagtggcggccgtcgtgccaaatggc
ctggttgccgtcaccaatgggaagctgtcaccgcctcgttttcctctcggtatggttagc
ggcagcgtgactgcaccaggttatggatttgaggccagtgaagaggacatagatcttgat
gataaggtggaggatttgatgcggagggacagcgctgtgatcaaggaggagatcaaatct
ttcctggccaacaggcggatctcacaggcagtggttgctcaggtaacaggaatcagtcag
agtcgaatctcccactggctcctacagcagggatcggacctcagcgagcagaagaaacga
gccttcttccgctggtaccagctggagaagaccaacccaggcgccactttggccatgcga
gcggcccctctggctctggaggaagtgatggagtggcaccagactccacccccgttttcg
ccagcccctgggggcttccgtctgagacgggggagcagattcacctggaggaaggagtgt
ctggctgtcatggagagctacttcagtgataaccagtatcccgatgaagccaagagagag
gaaattgccactgcctgcaacggtgtcattcaaaaaccaggaaagaagctgtctgatttg
gagagagttacgtctttgaaggtctacaactggtttgcaaaccgccgcaaagacatcaag
aggcgagctaacatagaagcagccatcttggagagccatggcatcgaggttcagagtcca
ggcggtcagtccaacagtgatgaggtggacggcaacgacttcccagaccagggttgtgag
gtgtccttatttgacaagagagcttcaaccaggcagtttgctttcagtcgggcggacttg
tcttctccaacccaggttcctcctcagctccccagctggttttctgccctggccagagga
ggcgtgtctggacagaggggggcgtcgctgatcgcccgctccctcgtgtcggggctgggc
tctcaggccgaaggctccagactgacaggtgcgtcctggtcccccccgtccccgtccctc
caggacgagccgagcctcccgagcgcgctgtccgaaccgcaggagccggtcagctcggaa
aagacggcggtgaaccacagcggcctggcctcggccgatcaggtggacggagcgcgaggc
agcgcgggaaaccggatcaagacggaaacgctcgaggatgactga
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