Kryptolebias marmoratus (mangrove rivulus): 108241700
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Entry
108241700 CDS
T05608
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108241700 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108241700 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108241700 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108241700 (rb1cc1)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108241700 (rb1cc1)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108241700 (rb1cc1)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108241700 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
TMF_DNA_bd
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108241700
NCBI-ProteinID:
XP_017281544
UniProt:
A0A3Q2ZRL3
LinkDB
All DBs
Position
LG20:9096808..9110158
Genome browser
AA seq
1626 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCALSYQKLLMKFNVAYTNYQQ
DLEEIKVKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPGKDSDETEEEKSTDSV
LCATQIPMPSKSSASLSASGTAACEPDGDQETNEMTDSGGLRAALLDEDVPELASQSVFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYRAWANALVKDGKQLYEAEKFKRESFGKLFRKS
FLRNRLFKGLDSWPPTSFCTRRPRRFDDELPDISLDDLQYLKSCCPAEVQPFLMVPTMCD
FEPLNHHVESLHQLVQAAQSVDEMSQTITDLLSEQRVSCSLRAQRLTSLTRQSESKPGTT
SSVSSKTPPSLSLQGPSCQPLHVPIPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQ
DTTTLQKENSRIVELQKAVEKYKYAAEESHSNLRSVKDDLYYLRGLVVKEQHDFGLALVS
MSSEVRTTVDEICQTHGTELKEQHQCELLSVRQELEKQVHALTEENQVNQSIVRDVQRAM
LELEGLMERKEKELTQLENEKERWAVKESDLTDQIKDLEQINSDRTEEVNMLSASKDSLA
SQLENLHFEIERSQQKIRQELEAAAQCHLQELEDRMNQEHKTEMDSLNKNNQVALENLAV
ENNAKLTEATDHHATAIKEKELQIKDLEARLTELAELRCKLEVEVAFKESETEEVRILFE
EAKSQQAEAINTQIEAETKVLRDELADFKRQLQAKNEEYEVDLAELRSLMRIEKDHCISE
LVNRHEEEAALLHTKVSTLQQQAQDAERNHAEQQQNLKEELLQQVAALSGEKEKQLRSFQ
ELELELRTLLNNLQAENDLLSKKLEHDKHAIQKDGDKEAAPDVVAQEAFKELEQQKEKLE
KELLDRIKQLEKELQEKQSLKSDDGLSLHADGRADAGAPLSLDSALQERLQQERASLQTQ
LELLERKKNEEMQNLKTSLIAEQQTNFNTVLTREKMKKEQVIRELTEKFQDVTQQQEKDK
ALIETLSEDRASLMQEKKHLEEELNRLRSSTTLVSSTFFSPNPSAPDASEPGAAAAAAAR
ALPVAEACSSGLLYETDRLASVAAIQDDEQVDSAVEASMVAVHDNMMSEEKQRIILLERT
LHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGP
TLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAV
PWNRKV
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacactgacatttgacaccgacctt
gctgtccagactgtgctggagcttaaacatgccatccaagccaaatataagattgcagtt
cagcatcaagtcctggtggtcaatggaggggaatgtatggctgcggacagacgagtctgc
agctacagtgcaggcactgaaaccaatcccatattcctgttcaacaaagagatgatcttg
tctgaccgggatccaacaatccccaaaaccaccttctcgattgaaagcgagatccaagtg
aaggtggaggagtcactactgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctctttttgtgaacgtttggtt
catgatgaacatctccaacatcaaggctgggcagctatcatggccaatctggacgactgc
gccctgtcttatcagaagttgctcatgaaattcaacgtagcatacactaattatcaacag
gatctggaggaaattaaagttaagctgtccaagttagggacttcagtttctgtaatggcc
aggatacctctgctggaatgtttgacaagacacagttacagagagagcatcgagaagtcc
agttcaaccccaggaaaggattcggatgagacagaagaagaaaaatccactgactcggtg
ctctgcgctacacaaataccgatgccctccaagtcatcagcctctttgtctgcttcgggt
acagccgcatgtgagccagatggggatcaggagacgaatgagatgacggacagcggcggg
ctaagagccgcgcttttagacgaagacgttccggagctcgccagccagtccgtgttcaat
gttacgctgttggactggatcaacgtacaagacagacctaatgatgtggaatccgttgtg
aggaaatgttttgattccatcaacaggctcgacccacggatcattcagcctttcctgacg
gagtgtcgggacacaattgcaaagctggataatcagaacatgaaatccatcaaagggctt
gaagacaggttatatgctcttgaccaaatgattgcaagctgtaagaagttggtaaatgag
cagaaagaactcgctcaggggtttttggccaaccagaagcgagctgaaaacctgaaggac
acgtctgttttgcctgatctgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgttagacattaaaaagaagtgcaccactgccaaacaagaactagca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgcttcatgcagatcaggac
ggagagaagctccaggctctcctcagacttctaacagagctaatagaaagagtgagggtg
gtggaggccctcagcaccgtgccccagatgtactgcttggctgtcgtggaagtcgtgagg
agaaaaatgtttatgcgccactaccgagcgtgggcgaatgctcttgtgaaggatgggaaa
cagctgtatgaggcagagaagttcaaacgggaatcctttggaaagctcttcaggaagtct
ttcctccggaatcgattgttcaaaggtcttgattcatggcctcccacttcattttgtacg
cgaaggcccagaaggtttgatgatgaacttccagatatctcacttgatgacctgcagtac
ttgaaatcatgttgtcctgcagaggtgcagccttttcttatggtccctactatgtgtgac
tttgagcctttaaatcaccatgtggagtcccttcatcagctggtccaagctgcgcagagc
gtggatgaaatgtctcaaactattactgacctactaagtgaacaaagggtgtcctgtagt
ctgagggcccaaagattaacatcattgacccgacagtctgaaagcaagcctgggaccaca
tcatcagtgtcctctaaaacacctccctctcttagccttcagggacccagctgccagccc
ctacatgtacccatcccagctcctttagaggatttatctcctgacagcattgatgcgcag
acatttgactttgaaaccataggccatccaaacatggatcctgtcctgcagcagggatcc
cttgacttggactctcttgcagagagcccagaatctgacttcatgtctgctgtcaatgag
tttgtgatcgaagagaacctgacctctcccaatcccatcagtgacccgaccagccctgag
atgatggttgagtcgctgtactcctcagtcattaatgctattgacaacaagcggatgcag
gacaccacaacactacagaaagagaactcaagaattgttgaactccaaaaagctgttgaa
aaatacaaatatgctgcagaggaatcccactctaacttaaggagtgtaaaggatgacctc
tactacttaagaggtctagtagtgaaggaacaacatgactttgggttagctctggttagc
atgagctcagaagtgcgtactactgtggacgagatctgccagactcatggaactgagtta
aaagagcagcatcaatgtgagcttctaagtgttcggcaagagcttgagaagcaagttcat
gcactgacagaggaaaaccaagtaaaccagagtattgtaagagatgtgcagcgtgcaatg
ttggagctcgaagggcttatggagcgcaaggagaaagaacttacccagctcgagaatgaa
aaggagcgatgggctgtaaaagagagtgatctcaccgatcagatcaaagacctcgagcag
attaacagcgatcgaaccgaggaggtcaacatgctttcagcttcgaaggactcgctggcc
agccagctggaaaacctgcactttgagattgaacgcagtcaacagaagattcgacaggag
ttggaagctgctgctcagtgccatttacaggagttggaggatagaatgaaccaggaacac
aagactgaaatggacagcctgaataagaataaccaggtggctctggaaaatcttgctgtt
gaaaataatgcaaagttaactgaggcaactgatcaccatgccactgccattaaagaaaag
gaacttcagatcaaggacttggaggctcgattgacggagctcgcagaactccgctgtaaa
ctagaggtagaggtagccttcaaagagtccgagacagaagaggttagaattttatttgag
gaggccaagagtcaacaggcagaggctataaacacccaaattgaggctgagaccaaagta
cttagagatgagttggccgatttcaaaagacagcttcaagcaaaaaacgaggagtatgaa
gtggacctggcagagctgaggagtctcatgaggattgagaaagaccactgcatttcagag
ctggtgaacagacacgaggaggaggccgctctgttgcacaccaaggtctctaccctgcag
cagcaagcccaggacgccgagagaaaccacgccgagcagcagcaaaacctcaaagaggaa
ttgctccagcaagtggctgctcttagtggagagaaggagaagcaactgaggagttttcaa
gaactggagctggagctgaggactcttctcaacaatttgcaggcagaaaatgacctgctt
tctaaaaaactagagcatgacaaacacgcaattcagaaggatggagacaaagaagcagct
ccagatgttgtagcacaagaagcctttaaagagttggagcagcagaaggagaagctggaa
aaggaacttttagacagaattaaacaacttgagaaagagcttcaagagaagcaatcttta
aaaagtgacgatgggttgtcgctgcatgccgatggccgtgcggatgctggagcgccgctg
tctctggactcggcgttgcaagagcgcctgcagcaggagagggcctccctgcaaactcag
ttagagctccttgaaaggaagaagaatgaagagatgcagaacctcaagacctcactgatc
gcagagcagcagacaaatttcaacactgttctaacccgagaaaagatgaagaaggagcag
gttatcagggagctcacggagaagttccaggatgtgactcagcagcaggagaaggacaaa
gctctaatagagactctgtccgaggaccgggcaagtttgatgcaggaaaagaaacacttg
gaagaagagcttaaccgcctgcgcagcagcacgacgctggtttcctccaccttcttttcc
cccaacccctcagctccagatgcttcagaacccggagcagcagcagcagcagcagcccgt
gcgctgcctgttgctgaggcttgttcttctgggctcctgtatgagactgacagactggcc
tctgtggcagccattcaagatgacgagcaggtcgattctgcagtggaagccagcatggtg
gctgtccatgacaatatgatgtcagaggagaaacaacggattatcttacttgagaggact
ttgcacatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcagagcatg
tcgtctgtgtcatcacggcattcagacaaaatcgccattagagatttccaggttggtgat
ttggtcctaatcatcctggatgaaaggcatgacaactacgtgttgttcacagtcggtccc
accctctactttctccactcagagtctctcactgcactggaccttaaaccagcatcaggg
acctcaagacgaccatgggttcttgggaaggtgatggaaaaggaatattgccaggcaaaa
aaggcccagaacagattcaaggttcctttaggtaccaagttctacagagttaaagccgtt
ccctggaacagaaaagtataa
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integrated database retrieval system
