Kryptolebias marmoratus (mangrove rivulus): 108241729
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Entry
108241729 CDS
T05608
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108241729 (tbc1d5)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108241729 (tbc1d5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
108241729
NCBI-ProteinID:
XP_017281596
UniProt:
A0A3Q3GTH8
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Position
LG5:13515698..13534958
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AA seq
876 aa
AA seq
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MQHPNFETRHPLQTDEQQETGFDPLLSFNKNRSRGSLDSSSYSQSTFHSYRKEWDDLFLN
SNYLARIRQAGIGGRLRSSRFRSVCWKLYLEVLPEDKRQWMSRTKELRAQYEKIKETHIT
NPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELKGMIKQDVFRTFPEIRYFQDEDVRTK
LTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFLHASETASPGEEMKCLLNPAY
LEHDAYAMFSQLMETAEPWFSSFEREVRKGKEEMLTSIPFARPQDSGPSVAIVTKVNRIQ
DQLVKKHDVELHMHLNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLDLV
DYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDINALLQKALFLRDPKNNPRPVNYQF
QQNLDYYKTRGADLMNTTRSGSGTKAAPLNMNKVSSSLLNFGRKLISPAVSGTSSSGVSP
MNAEVQAASSPAAPLASAPEPVLQHPLAEPSPATAPPPSHTQTQNYRLLKSESMPVHLSK
DGVSGGASLQAEAHSDAQGQSSRTVSSSPSTESLSGGRAQSTSSPPQPLSRGSDVSSSSP
PLSASKKESFFSITRSRSHSKSMGRGRETEEDLEAQVSFLQGQINDLEAMSKYCARMMNT
HICKIQEVILQEHLKKEDEVLVSLAGLKQIKDILKGALRFNQSQLESEENEEITIADDHY
TAAAAAAAAAETALNPVGHLSETRPGGGERPGRDSDLDGSVSTDEKDEEEPAITPPRQQV
ASSLGSEGRNWDDYILVSQDGDLLAEGRDGGGGGATSEHTLAIRRGRGVVRMEPEGAPGT
FHDPLTAGTASGSSSPEEGSTHSKDSDFTIVNPNDL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccccaactttgagacccgacacccactccagacggacgagcagcaggagacg
ggcttcgacccacttctcagtttcaacaagaaccgcagcagaggatctcttgacagcagc
tcttactctcagtctactttccattcatacaggaaagaatgggacgacttgttcctcaac
agtaattacctggccaggatccggcaggctggcatcggcggtcggctgaggagtagccgc
tttcggagcgtctgttggaagttatacctggaggttcttcctgaagataagaggcagtgg
atgagcaggaccaaagagctccgggcccaatatgagaagatcaaggagacgcacatcact
aaccctcgcaaagctgcaggccagcaggacctggtggtcaacaacccgctgtcccaggat
gaagggagcttgtggaacaagttcttccaggataaagagctgaaggggatgatcaagcag
gacgtgttcaggacattccctgagatccgctacttccaggacgaggacgtgaggaccaag
ctgacggacattcttttctgttatgccagggaaaacgagcagttgctgtataagcagggg
atgcacgagttgctggctcccatcgtgtttgtgctgcactgtgaccatcaggccttcctg
cacgccagcgagaccgccagccccggggaggagatgaaatgtttgctgaaccctgcgtat
cttgaacacgacgcatacgccatgttctcgcagctgatggagacggcagaaccgtggttc
tccagcttcgagagggaagtgaggaagggtaaggaagagatgctgaccagcatcccgttc
gccaggccccaggactctgggccatctgttgccatagtgaccaaagtcaaccgcatccag
gaccagctggtgaagaagcacgacgtggaactgcacatgcacctaaaccggctggagatc
gccccccaaatctacggcatccggtgggttcgtctgctgttcggccgcgagtttcctctc
caggacctgctggtggtgtgggacgctctgtttgctgacagcatcaccctggaccttgtg
gactacgtcttcgtggccatgctgctctacatccgagatgctttaattgctagtaacttc
cagacctgcctgggcctgctgatgcactaccctccaataggagacatcaacgctttgctg
caaaaggctctgttcctccgagatcccaaaaacaatcctcgcccggtgaactaccagttc
cagcagaacctggattactataaaacgaggggagctgacctgatgaacacaacgcggtcc
ggctccgggacaaaagctgctcctctcaacatgaacaaggtctccagcagcctgctgaac
ttcggccggaagctgatcagcccggccgtgtccggcacgtccagcagcggcgtgtcccct
atgaacgccgaggtacaagccgcctcctcacccgcggcccccctcgcctctgcgccagag
cccgtcctgcagcacccgctcgccgagccctctcctgccacagcgccgcctccgagccac
acccagactcagaactaccgcctgctgaagtctgaaagtatgccggtccacctcagcaaa
gatggggtttcaggtggagcgtctctccaagcagaggctcactctgacgcacaaggccaa
agctccaggacggtcagctcctctccgagcacagagagcctctccggtgggcgggctcag
tccacttcctccccacctcagcccctctccagaggaagtgatgtcagctcttcgtcccct
cccctttcggcctccaagaaagaatcgttcttcagcatcactcgttcccgttcccacagt
aaatccatgggcagagggagggagacggaggaggacctggaggcccaggtgtcgttcctg
cagggacagattaacgacctggaggccatgagcaagtactgtgccaggatgatgaataca
cacatctgcaaaatccaggaagtgattctccaggaacacctgaagaaggaggacgaagtt
ctggtgtcactggctggacttaaacagatcaaagacatcctaaagggggcgctgcgcttc
aatcagagtcagctggagtccgaggagaacgaagagatcaccatcgctgacgatcactat
acggctgcagcagcggcggcggccgcggccgaaactgctctgaatcccgtcggtcatctc
agcgagacccgaccaggaggaggcgagaggccgggccgggactctgatctggacgggagc
gtgagcacggatgagaaagacgaggaagagcccgcgataacgccacccaggcagcaggtg
gcgtcgtctctgggctcagagggtaggaactgggacgattacatcctggtgtcccaggac
ggagacctgctggctgagggcagggacgggggagggggcggtgccacgtcggagcacacg
ctcgctataaggagaggccgcggcgtggtgcgaatggagcccgagggcgccccggggact
ttccacgacccactgacggccggcaccgcctcgggctcctccagccccgaggagggctcc
acccacagcaaggactccgacttcaccatcgttaaccccaacgacctgtga
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