| Entry |
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| Symbol |
pnn
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| Name |
(RefSeq) pinin isoform X1
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| KO |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108241786 (pnn)
03015 mRNA surveillance pathway
108241786 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:kmr03019]
108241786 (pnn)
03041 Spliceosome [BR:kmr03041]
108241786 (pnn)
Messenger RNA biogenesis [BR:kmr03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108241786 (pnn)
Spliceosome [BR:kmr03041]
Complex C
Other components
EJC/TREX
108241786 (pnn)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG10:complement(19371346..19375927)
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| AA seq |
700 aa
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNDSRPGQIRRLSGPMAGLGGGGGGRG
RGINLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQ
SSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKLKRRSEI
EQKLEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNHLLKFI
RTKTKPHIFYRPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLNKMELRPRRQLNRDQ
DSSTASRMDHLTEGKPAGQVDKRTGKRGHAGMEEDDEEDEDEEDEKEKEGARKEAEQGGD
GEEREEGEKEGLKKIEEEEEGMEVSEEGREEKEGEQQETGENQKEKAEKKASPESEEMEM
EVEEKADKDDEGREEEVEPVSQQGPTEPQDVTAPNTQTSEAAVSNQESANIYQNQDTPAA
GEPAAQSPVIEGASPAPVPQTASAPPAQESITTVQDYIIPAQDFTSPVQDSTDEKQPVEV
KSVEEAPEKLPDAQEASIITPAKEGEDGGRGRKGEKEPRKRRSRSNSSSSSSSGSSSSGS
SSSSSGSSHSSSSSSSSSSSSSNSSSRSRSRDSGKRKRRAPDRNRDKKKEDERSHHKRGG
SSGGGRDSKERRKRRSEEGKGRSSRSDREHKDRDRKDKRR |
|---|
| NT seq |
2103 nt +upstreamnt +downstreamnt
atggcggtggtagtgcggagcttgcaagatcagctcgaaaaagccaaagaaagcttgaaa
aatgtggacgataatattcggaaactgaccggacgagatccaaatgattccagaccgggt
cagatccgtcggctcagcggccccatggcaggcctgggaggaggaggaggaggtagaggc
agaggaatcaacctgctcaggcgtagtctctcagatatggggagcggcggccctcctgcc
aagcagagggacattgaaggagccctgctgaggctggcaggagatcagagggccaggaga
gacgtacgtcacgacagcgacgccgaggatgatgacgatgtcaaaaaaccggcgttgcag
tcgtctgttgtagctacctccaaggagagaacacgccgagatctcatccaggatcaaact
atggatgaaaagggcaaacagaggaatcggcgcatgtttggcttgctgatggggacgctg
cagaaatttaagcaggaatcaaacgtctcttcagagaagctgaagcgacgttcagagatt
gagcagaagctcgaggttcaagctgaggctgagagaaagaaggtggaaaatgaaaagaga
gagctgtttgaagagaggagagccaagcagacagagttgagactgctggaacagaaagtg
gaattagctcagctgcaagaggagtggaccagccacaataaccacttgctaaaatttatt
cgtacaaagaccaagcctcatatcttctaccggcctggcaaaatgtgctccgcaacacag
aaactcctcgaagaatccaccaagaaactaaatgctgtgtttgaggagagacgcgaggcg
tttgcagaacacctcaacaagatggaactgcgtccgcggcgacagctgaaccgcgaccag
gacagcagcacagcctcaaggatggaccacctgacggagggtaagccagcaggtcaggta
gacaagcgaacaggtaaaaggggtcatgcagggatggaggaagatgatgaggaagatgag
gacgaggaggatgaaaaggaaaaagagggggctagaaaggaggcagaacagggaggagat
ggggaggaaagggaagaaggggagaaggaagggttgaagaagatagaagaggaggaggaa
gggatggaggtgagtgaggagggaagagaggagaaggaaggagaacaacaggagacagga
gaaaaccagaaggagaaagcagaaaagaaggcaagtccagagtcagaggagatggagatg
gaggttgaggagaaggcagacaaggatgatgagggcagagaggaagaggtagaaccagtc
agtcagcaggggcccacagagcctcaggatgtaacagctccaaacacccagacgtctgaa
gcagctgtcagcaaccaggaatcagcaaacatctatcagaaccaagacacccccgctgca
ggagaaccagcagcacagtcccctgtgatagaaggggcttctccagccccagtaccccaa
acagcttctgccccccctgctcaggagtccatcactactgtccaggattacatcatccct
gcacaggatttcacctctcctgtccaggactccacagatgagaagcagccggttgaagtg
aaatctgtggaggaggccccagaaaagctgcccgatgctcaggaggcctctataattact
cctgcaaaggagggggaggacggaggcagggggaggaagggggagaaagaaccgcggaag
cgccgcagtcgtagtaacagctcctcctcttcctcctccggatcctcctccagcggtagt
tcttcctcgtcctctggatccagccactcctcatcgtcgtcctcgtcttcctcgtcctcg
tcgtccaacagcagcagccgaagccgcagccgagacagcggcaagcgaaagagacgggcg
ccagatagaaacagagacaagaagaaggaggacgaaagaagtcaccataagagaggaggg
agtagcggaggagggagagactcgaaggagaggaggaagagaaggagcgaggaagggaag
ggcaggtcttcccggagtgatagggagcataaagatagagacaggaaggacaaaagacgc
tga |
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