Kryptolebias marmoratus (mangrove rivulus): 108241812
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Entry
108241812 CDS
T05608
Symbol
ntn5
Name
(RefSeq) netrin-1 isoform X2
KO
K06843
netrin 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108241812 (ntn5)
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108241812 (ntn5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Copper-bind
Motif
Other DBs
NCBI-GeneID:
108241812
NCBI-ProteinID:
XP_017281735
UniProt:
A0A3Q3AP87
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Position
LG7:complement(11036054..11055842)
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AA seq
830 aa
AA seq
DB search
MMFLPFSLPPSTSLIPVFLLHLLLLPPSLISSSFSHPPLSWTSPHEPCYHPGGRPRHCLS
EFINAAYGVPVNASHSLRGPDSEGNITTLTDLNNPHNLTCWRAHAGADRGDWVLTLPLGR
RFEITYISLQFCSQGEPTDPISISILKSMDYGRTWRPMQHYSSDCLGNFGQPPRTIAQIR
HQETEPLCSDPRPLQRQRGGMVLAFSALDGRPSSPDFDYSPTLQDWVTATDIRVIFHQVS
NDVGSFDKMKDAHWLDGPHDARGTGFLKWGSEIKGHAGDRVDKLNRDNTLAFFDSEIKVE
RVDKQRRKNHRKGSSQDEDGHNVTSKEEEGSFGMDLVALSKKGGKSRGRGRNKENSYWAP
CPNGDCNWTVEGRSRSNKGRELRKRRNNNVNARQSVGNLQVAQPSAFVFPVRAPVAVSDL
QVGGRCKCNGHASRCRRDDAGRAVCMCEHHTAGPDCDVCEDFHFDRPWHRATPTHPNPCV
ACECNGHSNKCRFSMEVFQQSGRRSGGVCLKCRHHTAGRHCQYCQNGYTRDHSKPLTHRK
ACQPCQCHPLGAVGRWCNQTSGQCLCRDGVTGPRCNRCAPGYKQGNSPLRPCVRIQEVAP
TPVYQPQYSIAEECVSYCQPSQVKVTMNLETYCLKDYVLKVQVKGTERSGPWWQFSISIQ
TVFRTGSNSRVRRGPQSLWVPDLDLSCGCPALHVGRTFLLIGAEEGERSWGPEESRLVAD
RSTLALQWREHWSSKLRGFRGQDKRGRCPQKSPNNHHRGREHTKTQSGYIPPHLLAEKDS
SRHGGDKQPMKVEETQTSAPPPKLSLHNKSTQTSLPSSAPVLMCSTPGPE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctgcccttctccctccccccctccacctctctcattcctgttttcctcctc
cacctcctcctcctccctccgtcgctcatctcctcgtcgttctcccaccccccgctgagt
tggacttcacctcatgaaccctgctaccacccgggtggccgtcctcggcactgcctgtcg
gagttcatcaacgccgcctatggagtcccggtcaatgccagccactcgctacgtgggcct
gattctgagggtaacatcaccaccctgacagacctgaataaccctcacaatcttacctgc
tggagggctcatgcgggtgctgacaggggagactgggtcctcaccctaccgctgggccgc
cgctttgagatcacctacataagtttgcagttctgcagccaaggggagccaacggatccg
atctccatctctatcctcaaatcgatggattacgggcgaacctggaggccgatgcagcac
tactccagtgactgcctcgggaacttcgggcagccccctcggaccatcgcccaaataaga
caccaagagacggagcccctctgctcagaccccagacctctgcagaggcaacggggcggc
atggtgctcgccttctccgctctggatggacggccgtcttctccggactttgactacagc
ccgaccctccaggattgggtaacagccacggacattcgagtgatcttccatcaagtgtcc
aatgacgtgggaagcttcgataaaatgaaggacgcccattggcttgatggtccccatgat
gccagaggaaccgggttcctgaagtggggctcagagataaaaggccacgctggagatcga
gtggacaaactaaacagagataacacactggcgttttttgacagtgagataaaggtggag
cgggtggacaagcagcgtcgaaagaaccaccgaaaagggtccagtcaagatgaagatgga
cacaatgtgaccagtaaggaagaggagggaagtttcggcatggacttagttgctttgtca
aaaaaaggcgggaaaagcagagggcgtggtcgcaacaaggaaaacagttattgggcccct
tgcccaaacggagactgtaattggacagttgaagggcggagcaggagcaacaaagggcgg
gaactgaggaagaggaggaacaacaacgtcaacgcacgacaaagtgttgggaacctgcag
gtggcgcagccgtctgctttcgtttttcccgtccgagctccagtcgccgtgtccgacctg
caggtcggaggcaggtgtaagtgtaacggacacgcctccaggtgtcgccgcgacgacgcg
ggccgcgcagtgtgcatgtgcgagcatcacacagcggggccggactgtgacgtctgtgag
gatttccatttcgacagaccgtggcaccgagccacgcccacccacccaaacccatgtgtt
gcctgtgagtgtaacggccactcgaacaaatgccgcttcagcatggaggtgtttcagcag
tcgggtcggcgaagtggaggcgtgtgcctgaagtgtcgccatcacacggccgggcgccac
tgccagtactgccagaacggatacacccgcgaccacagcaagccgctcacccaccgcaag
gcctgccagccctgtcagtgccatcccctgggggcggtgggtcgctggtgcaaccaaaca
tcgggtcaatgcctgtgccgagacggagtgactggccccaggtgtaaccgctgcgccccg
ggatacaaacagggcaattcccccctgaggccgtgcgtcagaattcaggaagtcgctccg
accccagtgtaccaacctcaatacagcatcgcggaggagtgtgtctcatactgccagccc
tcgcaggttaaagtcacgatgaacttggagacctattgtctcaaggattacgtgttgaag
gtgcaggtcaaagggacggagcgttcgggtccctggtggcagttttccatctccatacaa
accgttttccggacagggtccaactcccgcgtccgtaggggcccccagtccctatgggtc
ccggaccttgacctcagctgcggctgccctgccctccacgtgggccggacgttcctcctg
atcggcgccgaggaaggcgagcggagctggggccccgaggagagtcgcctggtggcggac
cgctccactctggccctccagtggcgggaacactggagctccaaactcaggggcttccgg
gggcaggacaaaaggggccgctgccctcaaaagtccccgaacaaccatcatcgaggcagg
gagcacacgaagacccagtcgggttacatcccgcctcacctgctggctgagaaagactcc
agtcgtcacggcggcgacaaacagccaatgaaagtggaagagactcagacgtcagcgccg
ccgccgaaactttcacttcacaataaatccactcagacgtcacttccttcttctgctcct
gttctgatgtgttcaactcccggtcctgaataa
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