Kryptolebias marmoratus (mangrove rivulus): 108241880
Help
Entry
108241880 CDS
T05608
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108241880 (lamb1a)
04518 Integrin signaling
108241880 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108241880 (lamb1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7822
Motif
Other DBs
NCBI-GeneID:
108241880
NCBI-ProteinID:
XP_017281845
UniProt:
A0A3Q3AGG7
LinkDB
All DBs
Position
LG1:complement(32944100..32990640)
Genome browser
AA seq
1800 aa
AA seq
DB search
MWIWTRIMLQLQLAVLLALQVSTYAQDNGASGGGALEDVIFPEFTDVCTEGSCYPATGDL
LIGRAHQLSSTSTCGLNRPEPFCIVSHLQEEKKCFVCDSAVTYNELNHHTNSHRIENVVT
TFAPNRLKTWWQSENGLENVTIQLKLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQ
VYRYFAYDCETSFPSVSQGPMQKVDDVICDSRYSDIEPSTEGEVIYRVLDPVFRIEDPYS
PQIQNLLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECA
PAEGRGQTREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAKGRNTNACKKCNCNQHS
DSCHFDMAVFLASGNVSGGVCEDCRHNTVGHNCEQCKPFYYQHPEKDIRDPNICHPCSCD
PLGSLNGGICDGRTDVRAGLIAGQCRCKANVEGERCERCKPAYFGLSDEPEGCKACTCSP
LGTAPGGNHCDDITGSCFCKRLVTGQECDQCVSEHWGLSNDIDGCRPCDCDLGGAINNHC
DQLSGQCVCKDHMFGRRCDQVESGFYFITLDHYTYEAEDAKFGHGVTVVPRPHPHDHSPT
WTGTGLVNVPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSR
CVNTVPDDDNQMISLHPSSRYVVLPRPVCLESGLNYTIRLSLPLYSALSDVHSPYTLIDS
IVLMPHCKNMEMFTTSENNAWETFQRYRCLENSRSVIKSQMTDICRNFIFSISALLHKGA
KECQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDTCAPATFQFGPSGCRACACNPEGSQS
PFCNQLTGQCVCVIGAYGRQCDRCLPGHWGFPSCRPCSCNGHADSCEADTGRCLACRDHT
TGHGCDRCLNGYYGDPVLGSGDHCHPCMCPDGPESLRQFAGSCYRSDDSEQVVCVCNTGY
KGARCDRCSPGYYGNPAEAGGQCLPCQCNSNIDMLDPESCDARTGECLRCLYHSEGSACQ
NCKLGYYGNALVQDCRKCVCNQLGSDPSRCRSPSDCHCDRRSGQCPCRSNVIGQHCDRCA
PNTWNMASGLGCQHCDCDPKHSYGMSCNEISGQCSCHPGFGGRTCNECRELFWGNPEVKC
HACDCDPHGVSEQQCNKVSGHCVCVEGVSGPRCDVCARGFSGTYPDCQRCHQCFAEWDNV
IGQLTNQTHRLVNKVNAIKASGVSGLYKKSLVSMEKSAADIQVILDQNPASQPLSEIQNL
LQQASDLMAALTQTLNNTEETLVLVRKQDSAVRTKVDSMTSDTQKLERTVQELLDQVEFI
KNSDIRGATESITKYFQQSQAAEVRANTSTIGTGSPVETSAALRHLTEDKLNQTAEEFLQ
RHSKHAQRLDTLAGELQTLDLSVISRKTCGSSLPGQNLCWSSSCGGLGCVDSEGQTRCGG
DGCDGAVTTASSVLMKAQESKEELMSTIAEVEKFSKMVSEVKRQAVEAKLSTQNVLMKTN
RTKHKVDQSNEELRSLIRQIKDFLTQDAADPESIELVANEVLAMQMPTSPAQLQNLTEEI
RQRVGELGHIESILQQRTDDIRRVETLLDRAGRAGKEAADVKDSAERVKQALEEVQRAQT
AASSAIQQATTDIQTTNQLLSSVQSETADAELKVHNATRRLQRLEQDVMLLRDKAVNVTL
SSKLTNQDAASIEQIAEDLKQDLESEVKQKYSTVEQLIGQKAEGVADAKKMAVSMQNEAK
QLLLQASDKLQLLKDLEKSYEDNQQTLEVKAEQLVELEEAVKKLLQEISHRVAAYSTCLF
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtggatctggacccggatcatgctgcagctccagctcgcggtgctgctcgctctgcag
gtgtccacctatgctcaggacaatggagcttcagggggtggggcccttgaggatgtcatc
ttcccagagtttactgatgtgtgcacagaaggtagctgttacccagcaacaggagacctt
ctgattggccgagcccaccagctgtcatccacctccacctgtgggctgaaccgtcctgag
ccattctgcattgtcagccacctgcaggaggagaagaagtgctttgtttgtgactcagcg
gtgacttacaatgaactgaaccatcacaccaatagccatcgcattgagaacgtggtgacc
acatttgctccgaacagactaaagacctggtggcagtcagagaatggtctggagaatgtc
accatccagctgaaactcgaagccgagtttcatttcacacatctcattatgacctttaag
acgtttcgaccggctgccatggtcatcgagcgatcagcagactttggaaagacatggcag
gtttaccgttattttgcatatgactgtgagacatccttcccatcagtttcccaaggtccc
atgcagaaggttgatgatgtcatctgtgactctcgttactctgacatcgagccatccact
gagggggaggtcatttacagagttctggatccagtgtttcggattgaagacccctatagt
ccacaaattcagaacttattaaagatcaccaacctgagggtgaaattcactaaactgcac
acactcggagacaacctgctggactctcgaatggagattaaagagaagtattattacgcc
atctacgacatggtggtccgaggaaactgtttctgctacggacatgcctccgaatgcgca
ccagctgagggcaggggccagaccagggagggaatggtacacggtcattgtatgtgtaat
cacaacactaaaggactgaactgtgaacagtgtcaggatttttaccatgaccttccatgg
agaccagccaagggacgaaacaccaatgcctgcaagaagtgtaactgtaaccagcactcg
gactcgtgccacttcgacatggccgtgttcttggcttcaggaaacgtcagtggaggagtt
tgtgaagactgtcggcacaacacagttggacacaactgcgagcagtgtaaaccattttac
taccaacatccggagaaagacatcagagacccaaacatctgccacccctgcagctgtgac
cctctgggctctctgaatggagggatctgtgatgggaggacagatgttcgagccggtctc
atcgctggtcagtgtcgctgcaaggctaacgtagaaggtgaacgctgtgagcgctgcaaa
ccagcttactttggtctcagtgatgaacctgaaggatgcaaagcatgtacctgcagccct
ctgggaacagcccctggaggaaaccactgtgacgacataacaggaagctgtttctgtaaa
cgtctggtgaccggacaggaatgtgatcagtgtgtgtctgaacactggggtctcagtaac
gacattgatggctgcagaccatgtgactgtgatctcggaggagccatcaacaaccactgt
gatcagttgagcggtcagtgtgtctgcaaagatcacatgtttggccgtcgctgtgaccag
gttgagtctgggttctactttatcactctggatcactacacctatgaagcagaagatgcc
aagtttggacacggagtgacagtggtcccgaggccccacccacatgatcacagtcccacc
tggacaggtactggtctggtcaacgttccagagggggccttcctggagttctctgttgac
aacattcctcattccatggagtacgacatcctcatccgctatgagccccagctgccggac
caatgggaggaggttctgatgacagtgatgaggcccggcccaatcagagctgacagccgc
tgtgtcaacactgtgcccgacgacgacaaccaaatgatctcacttcaccccagctcacgg
tatgtggttcttccaaggccagtctgtttggaatctggactgaactacaccatccgtctc
agtttgccgttgtactccgccctcagtgacgttcactccccatacacgctcattgactcg
atcgtgttgatgcctcactgtaagaacatggaaatgttcacgacttcagagaacaacgct
tgggaaacatttcagcgctatcggtgtctggagaacagccgcagtgtcatcaagtcccag
atgactgacatctgcagaaatttcatcttcagcatttccgccctgttgcacaagggggcc
aaagaatgccagtgtgacccccaaggctccctcagcaccgtgtgtgatcccagcgggggt
cagtgtcagtgtcgacccaatgtggttggcaggaactgtgacacttgtgctccagctaca
ttccagttcggaccaagtggctgcagagcatgtgcatgcaacccggaggggtcccagagt
ccattttgcaatcagctgaccggtcagtgcgtttgtgtcatcggagcgtatggtcggcag
tgcgatcggtgtctgccgggtcattggggcttcccatcttgcagaccctgctcatgcaat
gggcatgctgactcctgcgaggctgacactgggcgctgcctcgcctgtagggaccacacc
actggacatggctgtgacaggtgtctgaatggttactatggtgacccagtgctggggtca
ggtgaccactgtcatccctgtatgtgtcctgatggccccgagagtctgcggcagtttgca
ggaagttgttaccgcagcgatgactccgagcaggttgtttgtgtctgcaacacaggatac
aaaggcgctcgctgtgataggtgttcacctggttactatggaaaccctgctgaggcgggt
gggcagtgtcttccatgtcagtgcaacagcaacatcgacatgttggacccggagtcctgc
gatgctcgaacgggcgagtgtctgcgatgcctgtaccacagcgagggctctgcctgccag
aactgcaaactgggttactatggcaacgccttggttcaagactgcaggaaatgtgtgtgt
aatcagctggggagtgatccctccaggtgtcgatcacccagcgactgtcactgcgaccgc
agaagtggtcagtgtccctgccgctccaacgtgattggtcaacactgcgaccgctgcgct
cctaacacctggaacatggcgagcggcctcggctgccagcactgtgactgtgaccccaaa
cactcatatgggatgtcctgtaatgagatcagcggccagtgttcctgtcatcccggtttt
ggtggaagaacctgcaacgagtgcagagagttgttctggggaaaccctgaagtcaaatgt
cacgcatgtgactgcgacccccacggtgtctccgagcagcagtgcaacaaagtcagtggt
cactgtgtttgcgtggagggtgtgtcgggaccacggtgtgatgtctgcgcccgcgggttc
tcaggaacatatccagactgccaacgctgccaccaatgtttcgcagaatgggacaatgtc
attggtcagctgaccaatcagacgcatcgactggtcaataaggtcaacgccattaaagcc
agtggggtcagtggactatacaagaagtccttagttagcatggagaaaagtgctgctgat
atccaggttatcctggaccaaaacccagcctcacaaccactgagtgagatccaaaaccta
cttcaacaagccagtgacttgatggcagctctgactcagacactgaacaacaccgaggag
actctggttctggtgcgcaaacaggattctgctgtgagaaccaaagtggactccatgaca
tcggatacccagaaactagagcgaaccgtccaggagctgctggatcaggttgagttcatt
aagaactctgacatcagaggggccacagagagcatcaccaagtacttccagcagtctcag
gcagctgaagtgcgagccaacacctcaaccataggcactggtagtccagtggaaacctct
gctgctctacggcacctcacagaggacaaactcaatcagactgcagaggagttcctgcaa
agacactctaagcatgctcaaaggctggacaccctggcaggagagctgcagactttggac
ctgtctgtgatcagtcgtaagacatgtggcagttccttacccggtcagaacttatgctgg
tcttcgtcctgtggaggtctgggctgcgtggactctgaaggtcagaccaggtgtggagga
gatggatgtgatggtgctgtcacaacagccagcagtgtcctgatgaaggctcaggagtcc
aaagaggagctcatgagcaccatagcagaggtggagaagttctcaaagatggtgtcggag
gtgaagagacaagctgttgaggcgaaactgagcacccagaatgtcctgatgaagaccaat
agaaccaaacacaaagttgatcagagcaacgaggagctgcgaagcctcatcaggcagatc
aaagattttctcactcaggacgctgcagacccagagagcatcgaactcgtggccaacgag
gttttagccatgcagatgccgacctctccggctcaactgcagaatctgactgaggaaatc
cgtcagagggtaggagagctcggacacatagagagcatcctgcaacagaggactgacgac
atcaggagggttgaaaccctgctggaccgagctggcagagctggaaaggaggccgctgac
gtgaaggactccgcagagagagtaaaacaagcactggaagaagttcagagagctcagact
gcagccagcagcgccatccagcaggctaccaccgacatccagaccaccaaccagctgctt
tcctcggtccagtctgagacagcagatgcagaactgaaggtgcataatgccactcggagg
ctgcagaggcttgagcaggatgtgatgctactcagagacaaagctgtgaatgtcacactg
agcagcaaactgaccaatcaggatgctgcgagcatcgaacagattgcagaggacctgaaa
caggatctggagtcagaggtgaagcagaaatacagcacagtagaacaactgattggtcag
aaagcagagggtgtggctgatgccaagaagatggcggtgtcgatgcaaaatgaagccaaa
cagctgctgttgcaggccagcgacaagctgcagctgctgaaagatttggagaagtcttat
gaagacaaccagcagaccctggaggtgaaagcagagcagctggtggagctggaggaggct
gtgaaaaagctgctgcaggagatcagccacagagtagcggcttacagcacatgtctgttt
tag
DBGET
integrated database retrieval system
