Kryptolebias marmoratus (mangrove rivulus): 108241882
Help
Entry
108241882 CDS
T05608
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108241882 (lamb4)
04518 Integrin signaling
108241882 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108241882 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
LAMB4
F5_F8_type_C
POTRA_3
Motif
Other DBs
NCBI-GeneID:
108241882
NCBI-ProteinID:
XP_017281846
UniProt:
A0A3Q3AVF6
LinkDB
All DBs
Position
LG1:complement(32994963..33035722)
Genome browser
AA seq
1785 aa
AA seq
DB search
MIFIFLIVFFPEVKLQDHRDPQTQCHGSSCYPKLGDLMVGRAAQLSASSTCGLNRPQNYC
IIGYLEGEQKCFICDSRLPYNHYSNPNSHRIENIITTFDPERKTKWWQSENGVHHVSIQL
DLESVFQFSHLVLTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCALHFPSVPNETAFNI
NDVVCDSRYSEPEPSTGGEVVLKALDPVFEIENPYAANIQELITLTNIRVNFTHLFTLGD
TLLTRRRRNPQEKYYYSLYNMVVQGSCFCNGHASQCVPVDRGRGDVFAEPGMVHGRCICQ
HNTAGENCERCQEFHNNSPWRPGGENTANICRRCNCHGHSDSCHFDEVRYKATGGVSGGV
CDGCRHDRTGPQCERCRPFLYQDPRRGLDDPHACIPCDCDPAGSLDGGLCDVLSGQCLCK
ENVEGQRCNSCKRGFFGLRQDNPTGCDECECHGLGSVGSCDPLTGSCECEPLASGPRCDQ
CVAGFWGLGNSVFSCSPCDCDIGGAFNSMCSSEVGQCHCLPNMIGRRCSDPAPGYFLPAL
NYFLYEAELAAPLSGGFSTSLPPSPPSSPSSPLVNPALLPPCEQYFRSQGFDFKLSNGKV
VLVRKTRHTSRRRRRLKNGIPLEPGHTLQIIPRQRSADQSGTWTGLGFVRVMEGAGLIFT
VDNLPSSMEYQLVIHYEPQSLSDWLATVRIITLLSGDGGCSDNPTASKTMLLPATSKLSI
LDSGVCLNAEGQYLVEIIFHKKPGTDNLYLLVDSMGLIQKTESGQNFCSQRDLNSVHHFR
CIGLTVSPGSQESLLKICEGLIQSLSAKIHNGAIACRCNVVGSLGPACRKLSGFCECKPN
IIGRCCDSCAPLTFGFGPEGCKRCECDPQGSVSEMCDQVSGQCACRSHVTGPRCDRCQPR
FWDFPRCRLCECNNLSETCDRQTGECQACREHATGPNCERCENGYYGNPVTREPCQACLC
PDFLSSGRFFATSCQHDTQSLSVKCSCQEGHTGARCDRCRPGFYGDLTLPGAHCKVCPCN
NNIDLNDNKACDSLTGECLHCLYNTMGPQCQHCKSGYYGNALQQDCKECSCDRRGTELTR
CPLEGPCFCSPETGLCPCRAGVRGDLCDECEDGFWNLNRESGCQPCSCDPVNSISNICNK
VTGQCSCRPEFGGRLCKECGENHFGNPDLQCISCECNLKGTERPSCDPETGDCICRNGVS
GIFCDECAPGYFMFPVCKKCHPCTALWTESVTDVQKAAQRMRTFIPRHGNNQRSMDSRHW
QQIQDLLSKLDSLGNLMSLSLPKVEKVEKLLLKIRMLKDAIDINTIVIDSSLLFRTEMDN
ILLEFQKLLTNLKEKHIKYPNVEIKKLQVEELLNDIQKLHKTFMSDEKRLRSSTKAVEDS
IDTRQEVKRKLGTCKGRGELAMLEKKVKELSVLKLNQKICGEPDLEDCSECDGGPFCDGV
VPVAQKASKTAQEAKEHLIKLPSKLQESNNKINDIQQLAQDTKDQARDLQHRLSSNTGSL
EAEKNKTRALFQQFKHYLMDEMVRPDDIEKMAKAVLSIQISRPPAEIRSMISDINDLLNN
TPKIQDDVKMLEEGARTAQELLQKAKELKEQIKNTDVEEINRDLSAADRTVKEGHSSLTA
AKRDRDQAMDQLKDVEDKLDHMATKHMNQSEELLEEIEALKNKTEQNREMARSARDAADF
AVNITDQMDLHNVMMHFELLKQKHTNRTLGDEAADRLKEILMEAKDLERQVEDKLQQIRD
LEQKIEQLHKLKKQKAAEVSVLLETVDSLQKEILSRAEEYTTCTI
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcattttcctcattgttttttttccagaagtcaaacttcaggaccaccgagac
ccccagacgcagtgccatggcagctcctgttaccccaagctgggtgacttgatggtgggt
cgtgcagcgcagctttcggcctcatcaacgtgtggtctcaacagacctcagaactattgc
atcattggatacctggagggagagcagaaatgcttcatttgcgactctcgactaccctac
aaccactacagcaacccaaacagccaccgtattgagaacatcatcacaacctttgacccc
gagagaaaaacgaagtggtggcagtctgagaacggagttcatcatgtcagcatccaatta
gatctggagtccgtttttcagtttagtcacctggtcctcacattcaagagtttccggcct
gcagccatgttggtggagcgatccaaggattttggccgaacttggaaggtttttcgatac
tttgcagaagactgtgcgctgcatttcccttcggtcccgaatgagacagcctttaacatc
aatgatgtggtctgtgacagcagatactctgaaccagaaccatccactggtggagaggtg
gtgctaaaagctctggatcctgtctttgaaatagaaaacccatatgctgctaacattcaa
gagctgatcacgttgacgaacattcgggtgaacttcactcatctcttcacacttggcgac
accttgctgacccgtagacgcaggaaccctcaggagaaatattactactcactctacaac
atggtggttcaggggagctgcttctgtaatggacatgccagtcagtgtgttcctgtggac
agaggacgaggggatgtcttcgccgagcctggcatggttcatggtcgatgcatctgtcag
cacaacactgctggagagaactgtgaacggtgtcaggagtttcacaataactccccctgg
aggcctggaggagaaaacacagccaacatctgcagacggtgtaactgtcatggtcactcg
gattcatgtcacttcgatgaagttcggtacaaagcaactggtggtgtgagcggcggcgta
tgtgatggttgccgccatgacagaacagggcctcagtgtgaacgctgtcgacctttcctt
tatcaggacccacggcgagggctggatgacccacacgcctgcataccatgtgactgtgac
ccggctggttctcttgatggtggtctgtgtgatgtactgagcggtcagtgcctctgcaaa
gaaaacgtggagggtcagcgctgcaatagctgcaaacggggcttctttggtctgaggcag
gataacccgactggttgtgacgaatgtgaatgtcatggtttaggaagtgttgggtcatgt
gatccactgacaggaagttgtgaatgtgagcctttggcgagcgggccacggtgcgaccag
tgtgtggcaggtttctggggcttgggaaactccgtgttcagctgttccccctgcgactgt
gacatcggcggagctttcaacagcatgtgttcttcagaggttggacagtgtcactgttta
cccaacatgattggtcggcgctgctctgaccccgcccctggatattttctgcctgcgctg
aactacttcctgtatgaggcagagcttgctgccccactgtcaggaggattctccacttct
cttcctccttctcccccttcatccccctcgtctcctctggtgaatccagcccttttacct
ccatgtgagcaatacttcagaagtcaaggctttgactttaaactctccaatggaaaagtg
gttttggttcgaaagactcgtcatacgagtcgccgaaggagacggttaaagaatggcatt
cctctggagccaggtcacaccctgcagatcattccccgtcagaggtcggctgatcagtca
ggaacttggacaggccttggatttgtccgagtgatggaaggggcggggcttatattcact
gttgataacctgccatcatcaatggagtaccagctcgtgatccactatgaaccccagtct
ctttctgattggctggctacagttcgcatcatcacactgttgtcaggtgatggaggctgc
agtgacaacccaacggcaagcaaaacgatgcttctccctgcaacgtccaaattaagtatt
ctggactctggggtttgtttgaatgcagaaggtcaatatttggtggagattatctttcat
aaaaagccaggaactgacaatttgtacctcctggtggattcgatgggactgatccagaag
actgaatcaggtcagaacttctgctctcagagggacctgaactctgtccatcattttcgt
tgcattggattgactgtcagtcctggttctcaggagtcgcttttgaaaatctgtgaaggc
ctaatccagagtctgtcagcaaaaatccacaatggagccatagcttgcagatgcaacgtt
gttggttctcttggaccagcctgcaggaagctgagtggcttctgtgaatgtaaacctaac
atcatcggtcgctgctgtgattcctgtgcgccgctgacgtttggattcgggcctgaaggc
tgtaaaagatgtgaatgtgatccccaaggctcagtgtcagagatgtgtgatcaggtcagt
ggtcagtgtgcatgtcgctcacatgtaacgggcccacgctgtgatcgctgtcagcctagg
ttctgggatttcccacggtgccgactatgtgaatgtaacaacctatcagagacgtgcgac
aggcagacgggagaatgtcaggcctgcagggagcatgctactggaccaaattgtgaaagg
tgtgaaaatggttactatggtaacccggtcaccagagagccttgtcaggcctgtctttgc
ccagactttttgagcagtggacgattctttgctacttcctgtcaacacgacacacaatcc
ctcagtgtgaagtgttcctgccaggagggccacacaggtgcacgctgtgacagatgcaga
cctggtttctatggtgacctgacattaccaggtgcccactgtaaggtgtgtccctgcaac
aacaacatcgacctgaatgataacaaagcctgcgacagcttgaccggagaatgtctgcac
tgcctttacaacacgatgggaccacagtgccaacactgcaaatctggttattatggcaat
gccctacagcaagactgtaaagaatgctcttgtgaccggcggggaaccgagctaactcgg
tgtcctctggagggtccttgcttctgcagtccagaaactggactgtgtccctgcagggcg
ggggtaaggggagatctctgcgatgagtgtgaggatggattctggaatctgaacagagag
tccggatgtcagccctgcagctgtgatcctgttaactccatctccaatatctgcaataag
gtgacgggacagtgttcctgtcgtcctgagtttggaggaagactttgtaaagaatgtgga
gaaaatcattttgggaatccagacctgcagtgcatctcctgtgaatgtaacctgaaagga
actgagcgaccatcatgtgacccggaaactggcgactgcatttgtcgtaatggagtctct
ggtatcttctgtgatgagtgcgccccgggttacttcatgttcccagtctgcaagaagtgc
cacccgtgtactgccctgtggactgaaagcgttactgacgtccagaaagcagctcagagg
atgaggactttcatccctcgccatggcaacaaccaaaggtccatggacagtcgccactgg
caacagatccaggacctgctctccaagctggacagccttggcaacctgatgagtctctcc
ctgccaaaggtagagaaggtggagaaacttctcttgaagatcaggatgctgaaagatgcc
attgacatcaacacaattgtgattgactcctctctgctcttccgcactgaaatggacaac
attcttctggagtttcagaagctgctgacaaacctaaaagagaaacacatcaagtatcca
aatgtggaaattaaaaagcttcaagtggaagagctgctgaatgatatccagaagcttcat
aaaacctttatgtcagatgagaagaggctgagaagctccaccaaagctgtggaggactcc
attgacaccagacaggaagtgaaacgcaaactgggcacctgcaaaggcagaggagaactg
gcaatgctggagaagaaggtcaaggagctcagtgtgctcaaactcaaccaaaagatctgt
ggagagccggatctggaagactgttcagaatgtgatggaggtccgttctgtgatggagtt
gttcctgtagctcagaaagcatccaagacggcacaggaagcaaaggagcacctcatcaaa
ctcccgtcaaaactgcaggaatccaataacaagatcaatgacatccaacagctggctcag
gataccaaggatcaggccagagatctgcagcaccggctcagcagcaacactggatctttg
gaggcagagaaaaacaaaaccagggccctgttccagcaattcaaacattacctgatggat
gaaatggttcgtccagacgacattgagaaaatggccaaagctgttctgagcatccaaata
tcacggccacctgctgaaattcgatcaatgatcagtgacatcaatgatctgcttaacaat
acccccaaaatccaggatgacgtgaagatgctggaggagggtgccaggactgcacaagag
ctgctgcagaaagctaaagaacttaaggagcagattaaaaacactgatgttgaagagatc
aacagagacctttctgcagcagacagaactgtgaaggaaggccatagcagcctgacagca
gctaagcgagacagagaccaggccatggaccaattaaaagatgttgaagacaaactggac
cacatggcaacaaagcacatgaaccagtctgaagagctgctggaagagattgaagctcta
aaaaataaaactgaacaaaatagagagatggccagaagtgccagggatgctgcagacttt
gctgtaaacattactgatcaaatggatcttcacaatgtcatgatgcattttgagctttta
aagcaaaaacacacgaacagaacccttggggacgaagctgcggatcgtctgaaggaaatc
ttaatggaggctaaagacctggagagacaagtggaagataaactccaacagataagagat
ttggagcagaagattgagcagttgcacaagctgaagaaacagaaagcagcagaagtatct
gtgttgttagaaacagtggattcactgcagaaggaaatcctctctcgagctgaagaatac
accacctgtaccatctaa
DBGET
integrated database retrieval system
