Kryptolebias marmoratus (mangrove rivulus): 108241899
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Entry
108241899 CDS
T05608
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108241899 (mkrn1)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108241899 (mkrn1)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108241899 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_PARP12
zf-CCCH_9
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
108241899
NCBI-ProteinID:
XP_017281869
UniProt:
A0A3Q3AEC5
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All DBs
Position
LG1:complement(33441517..33453889)
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AA seq
431 aa
AA seq
DB search
MAEAAAASTAASSVTGGWTKHVTCRYFMHGLCKEGDNCRYSHDLSSSKPAAMICKFFQKG
NCVFGDRCRFEHSKPEKKEELPTTQTLPLPSVSQAGPSEPDPSGLTPGSGTQDWVNAAEF
VPGQPYCGRAEPVKVETSVPLIEEFDSDPAGDNKDLRKQLCPYAAVGECRYGINCAYLHG
DVCDMCGLQVLHPTDNAQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKSN
PSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDD
KQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNNRN
RNSRRTPLWDIFDERESTDSFDTEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcggcgtctacggctgcttcatcagtaacaggaggttggaccaaa
cacgtaacctgccgatacttcatgcatggtctttgcaaagaaggagacaactgtcgatac
tctcatgatctttccagcagcaaacctgcagccatgatatgcaagttctttcagaaggga
aactgtgtgtttggagaccgttgcagatttgaacacagtaaacctgaaaagaaagaggag
ctgccaaccacccagacgctgccgctgccttctgtctcacaggccggcccatcagaacct
gaccccagtgggctaacacctggatcaggaacacaagactgggtcaacgctgctgagttt
gttccaggacagccgtactgtggacgagcggagccggtgaaggtggagacttcggtcccg
ctcattgaagaatttgacagcgatccagccggggacaacaaagacttaaggaagcagctc
tgtccgtatgctgccgttggagagtgtcgctatgggatcaactgcgcctatctccacggg
gatgtgtgtgacatgtgtggtcttcaagtcctccacccgacagacaacgcccagcgctca
gagcacacaaaggcgtgcatcgaagcccatgagaaggacatggagatctcattcgccatc
cagcgcagcaaggacatgatgtgtggtgtatgtatggaggtggtgtttgagaagtccaac
cccagcgagcgccggtttggcatcctgtccaactgcagccactgttactgtctgaaatgc
atccgcaagtggaggagtgccaaacagtttgagagcaaaattatcaagtcttgtccagag
tgtcgaatcacgtccaattttgtcatcccaagcgaatactgggtggaagataaagacgac
aaacagaaactcatccagaaatacaaggatggcatggggagtaaaccgtgtcgatacttc
gacgaaggccgtggaacgtgtccttttggttcaaactgcttctataaacacgccttccct
gatggccgtctggaggaagctcaaccgcagcgacgacagactggatccaacaacaggaac
cggaactcgcggcggacaccactgtgggacatctttgacgagcgggaaagcacggactca
ttcgacaccgaagacgaggagatggtgacgttcgagctgagcgagatgctcctcatgctg
ctggctgcaggaaccgacgacgaggtgacagattcagaggacgaatgggacttgtttcac
gaggagctcgatgatttctatgagatttacctatag
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