Kryptolebias marmoratus (mangrove rivulus): 108241931
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Entry
108241931 CDS
T05608
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108241931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108241931
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108241931
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108241931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
RING_XB3-XBAT31
DUF5711
Motif
Other DBs
NCBI-GeneID:
108241931
NCBI-ProteinID:
XP_017281917
LinkDB
All DBs
Position
LG16:13840333..13843406
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AA seq
399 aa
AA seq
DB search
MDRSPGLLRHGCLSPEGTLREIQISLLECKVCFELFNSQQRERRPQNLSCGHVLCLECVT
ALSHPVLRKLECPFCRQLCSADGTSHCQVLSDLQQLLLSRSPSSSTPRPPPLCRTKGGPS
SSTGLRLRSVFGGWGTLVNPTGIAVLGPSGAVVVVHDGAKRVAVFSQQGRKLNSFGQRGK
AVGDICYPVDVAVSPAGCVVVTDAGDKAVKVFTSRGSHVVTVRDSFQLPWGVDTNSGGHI
LVSDVQAGMLSLLKVDYGQGVVLERRTAVSDLRCPRAVACCRATGNTAVMEHLAEEHQHR
RLKVFSQDFQLLHQVDGFSLSLQSSVRLNMSGVAFGGDGDVVLTDSDQGLVCSLGKLQSD
PALMPLVGNHLVRPVGLVVLNDTFIVLDGGDHTVKIYSA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtcccggcctcctgcgccacggctgtctgagtcccgagggcaccctgagg
gagatccagatcagcttactggagtgtaaagtctgcttcgagctgtttaattctcagcag
agggagcgcaggccgcagaacctctcctgcggacacgtcctctgcctggaatgcgtcacg
gctctgtcccaccctgtcctcaggaagctggagtgtccgttctgccgccagctgtgcagc
gcggacggcacctcccactgccaggtccttagtgacctgcagcagctcctgttgtcccgg
agcccctcatcctccactcctcgtcctcctcctctttgcaggactaaaggaggaccgtcc
tcatccacaggtctgcgtcttcgctccgtgtttggaggctgggggactctcgtcaacccc
actggaatcgccgttttggggccctcgggagctgtagttgtggtgcacgacggtgcgaag
agggtggcggtgttcagccagcaggggaggaagctgaacagtttcgggcaacggggaaaa
gccgtcggggacatctgctacccggtggacgtggcggtgtctcccgccggctgcgttgtg
gtgacggacgcaggggacaaggccgtgaaggtgttcacctccagggggagtcacgtggtc
acggtgagggactccttccagctgccctggggggtggacacaaacagcggcgggcacatc
ctggtttcagacgtccaggcgggcatgctgtccctgctgaaggtggactacggccagggc
gttgttctggagcgtcgcaccgccgtgtccgaccttcggtgtccccgagccgtggcctgc
tgccgagcgactgggaatacggcggtgatggagcatctggccgaggagcaccaacacagg
aggctgaaagtcttctcccaggacttccagctcctccaccaggtggacggcttcagcctg
tccctgcagtccagcgtgaggctgaacatgtcaggggtggcgtttggcggagacggagac
gtggtgctgacggactcagatcaggggctggtttgtagcttagggaagcttcagagtgat
ccggcgctcatgccgctcgtggggaatcacctcgtccggccggtcgggctggtggtcctg
aacgacaccttcatcgtcctggacggaggggaccacaccgtgaagatttactctgcctaa
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