Kryptolebias marmoratus (mangrove rivulus): 108241968
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Entry
108241968 CDS
T05608
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108241968 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108241968 (trip13)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
108241968 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_24
AAA_25
NPHP3_N
TIP49
AAA_5
TsaE
AAA_28
NACHT
RNA_helicase
AAA_17
ATPase_2
Cytidylate_kin
AAA_33
RuvB_N
AAA_7
AAA_RNF213_4
ABC_tran
IstB_IS21
bpMoxR
AAA_30
AAA_11
ATPase
DUF815
SLFN-g3_helicase
Rad17
NB-ARC
Mg_chelatase
AAA_19
DUF6393
PduV-EutP
NTPase_1
Sigma54_activat
nSTAND1
NRBF2
PhoH
nSTAND6
AAA_3
Motif
Other DBs
NCBI-GeneID:
108241968
NCBI-ProteinID:
XP_017281964
UniProt:
A0A3Q3G4A5
LinkDB
All DBs
Position
LG16:13738143..13743537
Genome browser
AA seq
422 aa
AA seq
DB search
MEADRMDVASKQNINVEVHVKSLSTAKLSEVRLHVQALLNRHSMVFGNYRWTEFDEEFLQ
RHVASVAIVDLEETITQPLDLKSCSVVIHVFTLNEEGPSMLSLEEDEELSAANHWLLPTA
EFHGIWESLVYETGVKTKLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCK
ALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFVL
IDEVESLTAARNACQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKIDLAFV
DRADIKQYIGPPSEKGIYNIYLSCIEELMKCQIVYPRQQLFTTYELETMGFAQSEVSEPS
LKLRSIAQKSKGLSGRALRKLPFLAHALFVKTPAVSLERFLDAMSRAVDKQREEKDDLIN
SV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgacagaatggacgtggcatccaagcagaacatcaacgtggaggtccacgtt
aaatctctcagcactgcaaaactgtctgaggtgaggctgcacgtccaggctctactgaat
cgccacagcatggtttttggaaactacagatggacagagtttgacgaggaattcctgcag
aggcacgtggcgtctgtggccatagttgatctcgaggaaacgatcacacagcccctcgat
ctaaagagctgctctgtcgtcattcacgtcttcactctgaatgaggaaggacccagcatg
ctcagtttagaggaggacgaggagctttcagcagcaaatcactggctcctgccaacagct
gagtttcacgggatctgggagagtcttgtgtacgagaccggtgtcaaaaccaagctcctg
gattacgtcacgacgacaatttacttctcggacaagaacgtcgacagcaacctgatctcg
tggaaccgcgtcgtgctgcttcacggacctccgggcacagggaaaacgtcgctgtgcaaa
gccctcgcacagaaactgtccatccggctgtcaagtcggtattcttacgggcagtttgtg
gagataaacagccacagtttgttctccaagtggttctcagagagtgggaagctggtcacc
aagatgttccagaagatccagcagctgattgatgacaaagacgctctcgtgttcgttctg
atcgacgaggtggagagtctgacggcggcgaggaacgcctgccaggcgggaacagaacct
tctgacgccattcgagtggtcaactccgtcctcactcagctggaccagatcaaacgacat
cccaacgtggtcatcctgaccacgtccaacgtgacggagaagatcgacttggcgttcgtg
gacagggcggacatcaagcagtacatcggccccccgtcagagaagggcatctacaacatc
tacctgtcctgcatcgaggagctgatgaagtgtcagatcgtgtacccccggcagcagctg
ttcaccacctacgagctggaaacgatgggcttcgctcagagcgaggtgtcggagcccagc
ctgaagctgaggagcatcgctcagaaaagcaaaggtttgagtggcagagcgctcaggaag
ctaccgtttctcgcccatgcacttttcgtaaagacgccggcggtaagcctggagaggttc
ctggacgccatgagccgagcggtggacaaacagagggaggagaaggacgacctgatcaac
agcgtgtga
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