Kryptolebias marmoratus (mangrove rivulus): 108242017
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Entry
108242017 CDS
T05608
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04514
Cell adhesion molecules
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108242017 (itga8)
04514 Cell adhesion molecules
108242017 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108242017 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108242017 (itga8)
04810 Regulation of actin cytoskeleton
108242017 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108242017 (itga8)
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin alpha subunits
108242017 (itga8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
DUF11
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
108242017
NCBI-ProteinID:
XP_017282059
UniProt:
A0A3Q3AP01
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Position
LG16:13471640..13515250
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AA seq
1164 aa
AA seq
DB search
MWSVRLVKCVCVCVGVKLCAEWGAQQLSLVSEALGADPVARGVSGRSVVSGGEGERTAHR
ERARMRPLRVSPNRDRLFTHLRTGSPSFPRLGLPRRLLRMERGWDCASSAGVFALAVLSV
LWLAPNGVWSFNLYAQHPTVYRGPDGSYFGYSVDFYQASTARSTISVLVGAPKANTSQPG
IVEAGAVYYCPWPGPPDSCRQIPFDNSNNRMIKVNGTREPLEFKSHQWFGASVRTHKGKV
VACAPLYHWRTLRKEGEKDPVGTCYVAVQNFSAYAEYSPCRTTDPDPEGQGFCQAGFSVD
FTKEGRLVVGGPGSFYWQGQVMTAGVAEILNRYSLKAILRQVAGEKQTRAAEDTNDDSYL
GYSVAVGEFTGDSEQELIAGVPRGAQSFGYVAMINSTNLTFIQNFTGEQMASYFGYSVAV
TDLDGDGTDDILVGAPLYMEREMESKPREVGRVYLYLQLAPLTFSRPVALTGTYTFGRFG
TAIAPLGDVNQDGYNDVAVGCPFGGEDRGGRVLIFNGNRDVSTQGLTLSQELRAARNPGG
GLPGYGFTLRGGEDLDSNEYPDLIVGAFGTGEVSVYRARAVVSVEATMTLTPKILNPDDR
QCFQPHTDKLFTCLKVDVCAAVSGVGIPSSVDLRAELQLDWLKGTRGGVKRVLFLDTQQP
QRTGLLRLGHSRPHSCLSYVIYLREEDEFRDKLTPISLALNYSLAPPSHDQPLPPVLNQY
SSTFLQEQAYILVDCGDDNICVPDLQLSASMDRAELVIGDDNLVTLTITAANNGEGAYEA
ELHTLIPPEADYIGVERRVESLSQLNCEFKTINETEIVVCDLGNPMVAGTELSVGLRFSV
QRLEDAGPDISFELQMHSSNKDNSDSNLVSLNLSITASARLDLRGVSHPSQVVLPFPNWE
PKEKPVKEDDVGPQVTHIYELHNSGPSSIGEADLQVGWPSRFQDENLLYAMEIQTDGPIS
CQTNTSLNPLGLQISALQDTPELLGFLRNSSDLPPSPPPPPLPPHRHRRSASAAGGYSSK
TLNCTNVSCLKIRCEVGRLDRGQSAVVRIRSRLWAHTFLQRRNDPYILNSTVSFMVISLP
YLVQPPTLQRHTTSMGTPVLWGTPDVSFAVPLWVIILAILLGLLVLAMLTLAMWKCGFFE
RARPPADDDVSDQEKLTADQTADA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctgtgcgccttgtaaaatgtgtgtgtgtgtgtgtaggggtgaagttgtgtgca
gagtggggggcgcagcagctcagtctcgtatcggaggctctgggggcagacccggtggct
cgaggggtgtcaggacggtcagtagtttctggaggagagggggagcgaactgcgcaccgg
gagcgcgcgcgcatgcggccacttcgcgtttcgccaaaccgggatcgactcttcactcac
ctgcgcacgggaagcccctctttccctcgcctcggcttgcctcgccgcctgctgaggatg
gagcgtggatgggactgcgcctcctccgccggggtgtttgcgctggcggtgctctccgtg
ctctggctggcgccaaacggggtctggagctttaacctttacgcgcagcatcccacggtt
tacaggggacccgacgggagttatttcggttattctgtggacttctaccaagcttccacc
gccaggagcaccatcagtgtgctggtgggggcccctaaagccaacacctcccagccaggc
atagtggaggctggagccgtctattactgcccctggcccggaccgcctgatagctgcaga
cagattccttttgacaactccaataacagaatgattaaagtcaacggcaccagagagcct
ttggagtttaagtcacaccagtggttcggagcatccgtcaggacgcacaaaggaaaagtg
gtggcatgtgctcctctctaccactggcggacattaaggaaagaaggggagaaagacccc
gtggggacctgctacgtggccgttcagaacttcagtgcctatgccgagtattcgccgtgc
agaaccactgatccagacccagaggggcagggattctgccaggccggtttcagtgtggat
ttcaccaaggagggaaggctggttgttggaggaccgggaagcttttactggcaaggccag
gtgatgacagcaggggtagctgagatactgaaccgctactctttaaaggccatactgaga
caagttgcaggcgagaaacaaaccagagctgctgaagacacgaatgacgacagctacctc
ggttactctgtggcagtgggagagttcaccggagactccgaacaagagctgattgccgga
gttccaagaggagcacaaagttttggatatgtggcaatgatcaactccaccaatctgacc
ttcatccagaacttcacgggggaacagatggcctcttacttcggttactcagtggctgtc
acggacttggacggagatgggactgatgacatactggtgggagcgcccctctacatggag
agggagatggagagcaaacccagggaggtgggacgggtgtacctgtacctgcagctggct
ccgctcacgttctccagacctgtcgctctcactggcacctacaccttcggacgctttggg
acggctatagcgccactgggagacgtcaaccaggatggctacaacgacgtggcagtgggc
tgtccgttcggaggcgaggaccgtggaggcagagtattgatctttaacgggaacagagat
gtatccacgcaagggctgacactaagccaagagcttcgagctgcccgcaaccccggcggc
ggtttgcccggatacggcttcactctgagaggaggcgaagacctggacagcaacgagtac
cccgatctgatcgtcggggcgtttggcacgggcgaggtctcagtctacagggctcgagct
gttgtgtccgtggaagctaccatgactctgactcccaaaatcctgaaccccgatgatcga
cagtgtttccaacctcacacagataagctgttcacctgcctcaaagtggacgtgtgtgca
gccgtgagcggtgtggggatccccagctctgtagatctgagagcggagctgcagctggat
tggctgaaaggcaccaggggcggagtgaagagggttctcttcctggacacccagcagcct
cagcgcaccgggctcctccggctcggtcacagccgcccacattcatgtctgagctacgtg
atttatctgagggaggaggatgagttcagggacaaactgacccccatctcactggctctg
aactacagcctggctccaccttcgcatgaccaacctctcccacctgttctcaaccagtac
agcagcaccttccttcaagagcaggcttacatcctcgtggactgcggcgatgacaacatt
tgtgtccccgacctccagctctctgccagcatggatcgcgccgagttggtgatcggagat
gacaacctggtcacgctgaccatcactgctgcgaacaatggagagggagcctacgaggcg
gagctgcacacgctgataccaccggaggcggattacatcggagtggagcgcagggtggag
tctctctctcagctaaactgcgagttcaagacgatcaacgagactgaaatcgtggtgtgt
gacctcgggaacccgatggtggcaggaacagagctgtccgtcggcctgcggttttcggtg
cagaggctggaggacgccggaccagacatcagctttgagctgcagatgcacagctccaac
aaagataactccgacagcaacctggtcagcttgaatctgtccatcactgccagcgcccgg
ctcgatttacgtggggtgtcccatccctcccaggtggtgctgcctttcccaaactgggag
ccgaaagagaaacctgtcaaagaggacgacgttggaccacaagtgacgcacatctatgag
cttcacaactctggtcccagcagcatcggagaggctgaccttcaggtgggctggccctcc
cgtttccaggacgagaacctgctgtacgccatggagattcaaacggacggcccaattagc
tgccagacaaacaccagcctcaacccgcttggcctccagatctcagctctgcaggacacg
ccggaactgctgggcttcttgaggaacagcagcgaccttcctccttctcctcctccgcct
cctcttcctcctcaccgccacagacgctccgccagcgctgcagggggctacagcagcaag
acgctgaactgcaccaacgtctcctgtctgaagatccggtgtgaggtcggccggctggat
cggggtcagagcgctgtggtccggatccgatccagactgtgggcgcacaccttcctgcag
cggcggaacgatccctacattctcaactcgaccgtgtccttcatggtcatatcgctgcct
tatctggtccagcccccgacgctgcagcggcacaccacctcgatgggaaccccggtgttg
tgggggactcccgatgtgtcgttcgccgttcctctctgggtcatcatcctggccatcctg
ctggggctgctggtgctggccatgctgacattagccatgtggaagtgtggtttcttcgag
cgggcgcggccgccggctgacgatgacgtctcggatcaggagaagctgacggcagatcaa
acggcggacgcctga
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