Kryptolebias marmoratus (mangrove rivulus): 108242069
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Entry
108242069 CDS
T05608
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108242069
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
108242069
NCBI-ProteinID:
XP_017282152
UniProt:
A0A3Q3BIM5
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Position
LG9:complement(12559412..12579395)
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AA seq
1195 aa
AA seq
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MERGHVSVRRGVSWSPGGLRKPLQLKEDARCSGSDENTPWERMASNGEHVSRKTSLTRSA
SLSEKELREARLKSQIIAAQLTVPSNSSSTSRGVQLFNRRKQRVNAFTHETSGRGSEVDE
TENVKNNPSSDKPTWAECSSEEKNKDLNLKNTKPLVLSPLRTVGDIMDEPSRDFHQEHVD
NSIIQERHFLPVKEEEEEEETKEEIQEVLKDNVMHGTPLERNHTDTVQMAHVDQGTETNE
GHAGLVSSKKLPNGCHSTSGPERASIPPSKQAATTLNRTARPFFSPPTVLSSEAASPVMN
IPPPPSYSTPPLPFSAVPHPVTFSPLPPPPSYPTPPLPAFTNQPPQTFYSSPPPMSPVMP
ASSPLPSQFPVSQHPPVRQCGPPTAPKPSTFVPHPSEEERKLITPIKTGILEEGTARRAT
KKSMFTFKEKQVVAPNPELLSLVQGADERKKLGHRSVPEPVSEEELMALGAEASNFLAKE
ESRTEGAKAPEWTSCLKSSKTRPRVEHQPEQTLTNVSGKGAELFAKRQSRMEKYVVENQN
VGQIRSPSPAMSLPPSWVYPSNMPGRVKAIAKNSDMSAQLSQNLKAQQAVKQKPRPRAAS
PEPVPEPTALENGCSKIEMDLSRHRPYQLNSSLFVFNPVKDPISTLPRGAPQAKNPLTTS
TFPKQTSLTNSTPPRFQSMSPQLPLSPTRAPEHPSNPTFGHPRISSPLSAFSPERVSSPR
SGVQAPRPTFSAKKAGITPQVSQESSTGEVAGGTPTPTSTPSIAKRFSSPDGPISRTWTS
SSQTNQPSAVVSGSIRSVTSPVTSSGNTKYQPLTTNQSVQCSAGASASTPRPSQTPTSPC
SPPWGSRCQSPAVGQSSTPASFRSPEISKIHSPLSPPWGAKCQSPTVSRNNKTSTAASFS
TSRPSLTPQASSPLSPPWGSRSQSPAAGQNIQFSTGFSVPVSRPSQTSLWGSRSQSPAAS
QNTHFSTISTSRPSQTPPWGSRCQSPLINQNTQSSTVTISTSRPTQTSTSTSPACPPWGS
RSQSPALFQSSLSFQPTNPPHTSTTSPPPRPKDSRCMSPDGNSLDSRVNHRLLAKNIINA
AKRKNSPSPGALSGHSLPISPVGHAHHDWQKSPIGHFQSRSLGAQSPTFTSPPPTPTQRI
CSPVRLYNTRSLTDSDASVESEDSGLRSPGLHSYHTCPRGWGSLRVKRGSVSTDL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggacacgtgtccgtcaggagaggggtgagctggagcccgggaggactgagg
aaacctctgcagctaaaggaggacgcgcgctgctccgggtccgacgaaaacacgccgtgg
gagaggatggcctccaacggggagcacgtcagccggaaaacgagtctgaccaggagtgcc
agtttatcagagaaggagctgagggaggcgcgcctgaagagccaaatcatcgccgctcag
ctcaccgtcccatccaactccagctccacctccaggggtgtccagctctttaatcgccgc
aagcagagggtgaatgccttcacgcacgagaccagtggacggggctcggaggtggacgaa
acggagaatgtgaaaaacaacccctcgtctgacaagccgacatgggcagagtgcagcagt
gaggagaagaacaaagaccttaacctgaagaatacaaagccactcgtcttgtcgccttta
cgcactgtaggtgatatcatggatgagccgagtagggattttcatcaagaacacgtggac
aacagcattatccaggagagacatttccttcctgttaaagaggaagaagaggaggaagag
acaaaagaggagatccaggaggttctaaaggacaatgtcatgcatgggactcctttggaa
cgaaaccacactgacacagttcagatggcacatgttgatcaggggacagaaacaaatgag
ggccacgcaggactggtttccagtaagaagcttcctaatggttgtcacagcacctctgga
ccagagagggcctccatacccccatccaagcaagcagccaccaccctcaacagaaccgcc
aggcctttcttctcacccccgacagtgctgtcttcagaggcagccagccctgtcatgaac
atcccacctcctccatcttactccactcctccgctccctttttcagctgtccctcatcct
gtcacgttctcacctttgcctccgcccccatcttatccaacacctcctctgccggccttc
acaaatcagccccctcagaccttctactcaagcccgcctccgatgtctcctgtcatgcct
gcttcctctcctctgccatcccagtttcctgtttctcagcacccacccgtccgccagtgt
ggcccccccactgccccaaagccctccacctttgttccccatccctctgaggaggagagg
aagctgataacgccaatcaaaacaggaatactcgaagagggcaccgccagaagggcaacg
aagaaatcaatgtttacattcaaagaaaaacaagtggtggctccgaacccagagctgctc
tccctggtgcaaggggcggacgaaagaaagaaactcggccacagatctgtccccgagcca
gtatctgaagaggagttaatggctctgggagctgaggcctccaacttcctggccaaagaa
gaaagcaggacagagggagcaaaagcgccagagtggacctcttgtctcaagagctcaaag
acccgaccgagggtggagcaccaaccagagcaaactctcaccaacgtgtcaggaaaagga
gccgagctgttcgccaagcggcagtccaggatggagaaatatgttgttgagaatcagaat
gtgggacaaatcaggtctccctctcctgcaatgtctctgccaccatcttgggtttatcca
tcgaacatgcctggacgcgttaaagccattgccaagaactctgacatgagcgcccagctc
tctcagaacctgaaggcccaacaagcagtcaagcaaaaaccgaggccaagggctgcatca
ccagaaccggttcccgagccgactgctttggaaaatggctgctccaagattgagatggac
ctctcgcggcatcggccttaccagcttaactcgtccctcttcgtctttaacccagtcaag
gacccaatcagtaccctccccagaggagcaccacaggccaagaacccacttaccaccagc
actttccccaaacagacttctctaactaacagcaccccacctcgcttccaaagcatgtct
cctcagctgcctctcagtcccacaagagcaccggagcatccctcgaatccgacgttcggg
catccaaggatcagctctcctctgtctgccttctctccagagcgagtctcctcccctcga
tcgggagttcaggctccgaggcccacgttttctgccaagaaggcgggaattacaccacag
gtatcacaggagtcctccactggtgaagtcgctggtggaacacccacaccaacgagtaca
ccaagcatcgcaaaacgtttcagcagccccgacgggccaatctcaagaacctggacctcc
agctcccaaacaaaccaaccctccgccgtcgtcagtggctccatcagatcggtcacttcc
cctgtcacctcttccgggaacacaaaataccagccattaacgaccaatcagagtgtccag
tgttctgctggtgcctccgcttctacaccgagaccttcccaaacacccacatctccatgt
tctcctccttggggatccagatgtcagtcaccagcagtcggccagtcctccaccccagct
tccttcaggtccccagaaatctcaaaaatacactctcctctttctcctccttggggcgca
aaatgccagtctccaactgtgagccggaataacaagacctctacagctgcctctttttcc
acatccagaccctccttgacacctcaggcgagttctcctctctctcctccgtggggatca
aggagtcagtctccagcggcgggtcagaatatccagttttccacagggttttctgttcct
gtgtcaagaccttcccaaacttccctatggggatcaaggagtcaatcaccagcggcgagt
caaaacacacatttttccactatttccacatcgagaccttcccaaactcctccgtgggga
tctagatgtcaatcaccattgataaaccagaatacccagtcctccactgtcaccatttcc
acatccagacctacacaaacatcgacatccacgtctcctgcctgtcctccatggggttca
cgttcccagtcccctgcactctttcagagcagtctgtcgtttcaacccacgaatcctcca
cacacatctaccacctctcctcctcctcgaccaaaagacagtcgctgtatgtcccccgac
ggcaacagtttggactccagggtcaaccatcgcctcctggcaaagaatatcataaacgca
gccaaacgtaaaaacagcccgtcccccggcgcactgagcggccacagcctccccatctca
cctgtgggacatgcccaccacgactggcagaagtcacccatcggccacttccagtcccgg
tcgttgggggcacagtccccgactttcaccagtccccctcccaccccgactcagagaatc
tgctcgcccgtgaggctctacaacacccgttccctgaccgactcggacgcctctgtcgag
tctgaagactcgggcctccggtcgcccggcctgcactcctaccacacctgcccccggggc
tggggcagcctgagagtcaagagaggctccgtctccactgacctgtga
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