Kryptolebias marmoratus (mangrove rivulus): 108242128
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Entry
108242128 CDS
T05608
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108242128 (samd4a)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108242128 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Motif
Other DBs
NCBI-GeneID:
108242128
NCBI-ProteinID:
XP_017282256
UniProt:
A0A3Q3BCI9
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All DBs
Position
LG15:complement(28003426..28060713)
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AA seq
717 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPVLISQWQGEPKERVISLVLTHLPLLKPGNTEAKGEYMLLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAATRGDSLERPPPAGPHHHQSTPPSTL
NSSGSSSSTNTSSSGNLYNLHHHQRYGSDDRLNGWQNSRDTGIGGGWHQQQGCENGHLLL
YPSSSMPSTINTVGTSGGNNTILTSGGGSQQHSPLKRSVSLTPPISGPNNQPLGHVWLSQ
EDLRTARGPAPDHAPLSPQSSIASSGSGGSEHLDDAGLGGSSGLHRSSFHEEGSGMRDVP
AWLKSLRLHKYAALFSTMTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKERQNLLRS
LEKDVLEGGNLRAPLQELHQMIMTPIKAFGGGDESSLQRPLLTPQGKSAHLSGGGGGGEG
ESGASVIAEGDLPAQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHESFTETQKKR
LLTWKQQVQRLFRSIPRKTLLDIAGYRSQRSRFGQSNSLPTAACVGGSLSARRSLHQFQM
PSRSLPAARLGLLGSAGLLGPTPRSSSSTPTGPKQGRHGPWFANPGGSNSMPSRTHSSVQ
RTRSLPVHTTPQTMGTFQQADHQLPVTEPDINNRLESLCLSMTEHALGDGADRTSTI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtgggcgtgttggccagctggttcaaggggtggaacgagtgc
gagcagacggtggccctgctgtcgctgctgaagagggtgagccggacccaggcccgcttc
ctgcagctgtgcttggagcactccctcgccgagtgcaccgagctgcaggtcctggaagga
gaggccaacaatccagttcttattagtcagtggcaaggtgaacccaaggagcgggtcatc
tctctggtccttacgcacctcccgctgctcaaacccggcaacactgaggccaagggcgag
tacatgctcctgctgccacgtatcctggcccacaccatcgagcacggccatcacctggag
gagtcccgccagctcctgtcctacgctctcatccaccccgccacctctctggaagaccgt
gctgctctggctctatggcttaaccacctggaggagagggccgccacacggggagattcg
ctggaaagacctcctcctgctgggccccaccaccaccagtccacacctccatccactctc
aactcatcaggatcctcgtcctccacaaacacctcgtcatcaggcaacctgtacaacctg
catcatcaccagcgttacggctcagacgatcggctcaacgggtggcaaaattcaagggat
acagggatcggcggaggctggcatcagcagcagggctgtgagaacgggcacctcctgctt
tacccgtcatcctcaatgccatcaaccatcaacacagttggaaccagtggaggaaataac
accattctcacaagtggaggtgggagtcagcagcacagccctctaaagcgctccgtgtcc
ctcacccctccaatcagtggccccaacaaccaacccctgggccacgtgtggctgtcccag
gaggacctgcggactgcaagagggccggcgccagaccacgcgcctctctccccgcagagc
agcatcgcctcctcgggcagcgggggcagcgaacatctggacgatgctggtttagggggc
agctcaggtctgcatcgcagctccttccacgaggaggggagcggcatgagggatgttcct
gcgtggctgaaaagtcttcgtcttcataaatacgccgccctgttctccacaatgacctac
gatgagatgatgtcattgactgaagagcagctggaggcacagaaagtcactaaaggagcc
agacacaagattgtcatcagcattcagaaactgaaggagaggcagaaccttctgcgcagc
ctggaaaaggatgtcttggagggtgggaatctacgcgcccctctgcaggagctccaccag
atgatcatgactcccatcaaggctttcggcggtggcgacgagtcctctctgcagcgcccc
ctgctgaccccacagggcaaaagtgcccacctctccgggggcggcggaggaggggagggc
gagtccggcgccagcgtgatcgctgagggggatctacctgctcagttcactcgtgtcatg
ggcaaagtttgtacccagctgctggtgtcacggccggatgaggagaacatcagctcctac
ctgcagctcattgacaagtgcctcatccatgagtccttcactgagacacagaagaagagg
ctgttgacatggaaacagcaggtccagaggctcttccggtccattccaaggaaaaccctg
cttgatatagcagggtaccgatcgcagaggagtcgttttggtcagtccaactccctgccc
accgctgcctgcgtcgggggcagcttgtcggccaggaggagcctccaccagttccagatg
ccctccaggagcctgccagcagccaggctgggtctgctgggcagcgcggggctactgggc
cccacacctcgcagctccagcagcacccccaccggtcccaagcagggcagacatggcccg
tggtttgccaaccccggaggaagcaacagcatgcccagccggacccacagctccgtgcag
aggacccgctccctgcccgtccacaccacgccacaaaccatgggcaccttccaacaagct
gatcatcagttaccagtgacggagccggacataaacaatcgcctggagtctctgtgtttg
agtatgactgagcacgccttaggagacggtgctgaccgcacgtcaactatatga
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