Kryptolebias marmoratus (mangrove rivulus): 108242148
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Entry
108242148 CDS
T05608
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108242148 (snx13)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108242148 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
108242148
NCBI-ProteinID:
XP_017282292
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All DBs
Position
LG5:12662399..12681965
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AA seq
997 aa
AA seq
DB search
MGSLVCALRSLGHEGVRRLILLHALLLWHSARTLTALRQASLSIWGWGGLGVVLFLVTFG
PFAIFYLAFYIFCFIGGGFLVTLLYGKINSEKHLEKCEHSYLSPTQIGIVKTLDEMKLEM
KPIKIDRRLTGSSIIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTLQTALIQFS
TRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLADREDKQRDITDELVDSFFEAEVEME
RKICRDIVCTSHKDEEGFLRDLCELLLYLLLPPGDFHNKSMRYFLREVLAYGVLLPLINQ
LSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKPPELEAVKDKVVEELQYLRSLDTAGD
DINVIKNQINSLMFVKKVCETRIQRLQSGKEVDTLKLAASFGKLCVIPLDHILVHNIALQ
FFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLMVMEGWQKDEKKQPGTTKGLLRVAALGV
YEQYLSDKASPRVQVDTALVTKLGEKLQKDDPTPEIFDEVQRKVYEMMLRDERFYPSFKQ
SPLYVRMLAELDMLKEPSYRGSDDGEGESFNGSPTGSLNLSLDDLNNACHDEFTQLHAYI
SDTADLCLPGFWGATGVCNDHGKTYALYTITVFRRTQDGSEDCWKTYRRYSDFHDFHMRI
TEQFESLSSILKLPGKKTFNNMDKDFLEKRKKDLNAYLQLLLNPEMVKGCPNLIPHVYDF
LENKAYSKGKGEFARKIDTFVNPLRSSMRNMSNAVKSLPDSLAEGMNNMGRMSERLGQDI
KQSILKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRN
IKNLLQQLIRATYGDTINRKIVDHVDYLTSPEQVADYVKKFRDSYWPNGILAETPPRRDK
CIRMRTRVAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGFL
ETMFPQYKFPELFVKLHSRSPRIHKFSQKLKGSLLKR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcctggtgtgtgccctgcgctctcttggacatgagggcgtcaggcgactcatt
ttgcttcatgcgttgctgctgtggcactcagccaggactctgactgctctgagacaggcc
agtctgtccatctggggatgggggggccttggagttgtgctgttcctcgttacctttgga
ccttttgccatattctacctggccttttatatcttttgctttattggagggggctttttg
gtcactttgctttatggaaagataaactcagagaagcacctggaaaagtgcgagcactct
tacttgtcacccacacaaattggtatagtgaagacactggatgagatgaaactggagatg
aagcctataaaaatcgacaggagactgaccggctctagtataatcgacgaaccactacaa
caggtgatccagtttgcgctgagagactacatccagtactggtactacacgctgagtgaa
gacgagtccttcttactggagatcagacagacgctgcagactgccctcatccagttctcc
acacggtccaaagaggtggactggcagccttacttcaccactcgcctggtggacgacttt
gccacccatttacgtgtctttagaaaagcccaggatcgcctcgctgacagagaggataag
caaagggacataaccgacgagctggtcgactcgttctttgaggcggaggtggagatggag
aggaagatttgtcgagacatagtttgcacttcgcacaaagatgaagaaggttttcttcga
gatttgtgcgagttacttctgtatctgttactacctcctggtgattttcacaataagagc
atgagatacttcctaagggaggtgctggcgtacggcgtgctccttcctctgatcaaccag
ctgagcgatccagactacatcaaccagtttgtcatctggatgattcgagactccagctgc
aactatgaagccttcatgaacatcttgaagctaacagacaagcctccagagctggaggcc
gtgaaggacaaggtggtggaggagctgcagtatctccgctccctggatactgctggagat
gacatcaatgtgatcaagaaccagataaacagtcttatgtttgtgaagaaggtgtgtgag
accagaatccagaggcttcagtctggaaaggaggtcgacacgttgaagctggcagccagc
tttggcaagctgtgcgttatcccgctggatcacatcctcgtccacaacattgctctgcag
ttcttcatggacttcatgcaggctgccggggcccaggcggagctcttcttttggctcacc
gtggaggggtacagagtgacggcgcagcagcagctgatggtgatggagggctggcagaaa
gatgagaagaagcagcccggcaccacaaaggggctcctcagggtcgctgctctgggcgtc
tatgagcagtatctttctgacaaggcgtctcccagagtacaggtggacacggcgttagtc
acgaagctgggagagaagctacagaaagacgaccccacacctgagatatttgacgaagtt
cagagaaaggtgtatgagatgatgctgcgagacgagcgcttttacccctccttcaagcag
agccctctgtacgtgcgcatgctcgcggagctggacatgctgaaggagccgagctaccga
ggatccgacgacggggagggagaatccttcaacggctccccaacgggaagccttaacctg
tcactggatgacttgaacaacgcctgccatgatgaatttacacagctacatgcctatatc
tctgacacagctgatctttgtctccccggcttctggggtgccacaggggtttgcaacgat
catggtaagacctacgcactttataccatcaccgtgttcagacggacccaagacggcagc
gaggactgctggaagacctacaggcgctactcggacttccacgacttccacatgagaatc
acggaacagtttgagagcttgtcatcaatcctgaagctgccagggaagaaaacctttaac
aatatggacaaagacttcttggagaagagaaaaaaggacctcaatgcttaccttcagctg
ctgctaaacccagaaatggtgaagggctgcccaaatctgattcctcacgtctacgacttc
ctggagaacaaggcctacagcaagggcaaaggagagtttgcacggaagatagacacattt
gtgaatcctctacggagctccatgaggaacatgtccaacgcggtgaagtccctgccggat
agtctggctgaggggatgaacaacatgggccggatgtcagagagactgggtcaggacatc
aaacagtccatactcaaggtgcctccactccttccgaaatccgatatcgacccagaacac
tgtcgagtctccgctcagctcgacgacaacgtggatgataacatcccgctgcgggtgatg
ctgctgctgatggacgaggttttcgatctgaaagagaaaaaccagtggctgcgcaggaac
atcaagaacctgctgcagcagctcatcagagccacttacggagacacgatcaacaggaaa
atcgtggatcacgtggactacttgacgtcaccagagcaggtggccgactatgtgaagaag
ttcagggattcctattggcctaacggtattctagcggagactccaccgcgccgggacaag
tgcatccgcatgaggacacgagtagctgccaagacgagtctgttgggcatcatgccagat
gagctgaaacacatcattggagcggacaccacaagaaaggggatcctccgagtcttcgac
atgtttcagtaccagcccatgaaccggcgactcgtctacgtgttcttggagggcttcttg
gagaccatgttccctcagtacaaattccccgagctcttcgtcaagctgcactcccgttcg
cctcgcatccacaaattcagccagaaactcaaaggctccttgctgaagaggtga
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