Kryptolebias marmoratus (mangrove rivulus): 108242181
Help
Entry
108242181 CDS
T05608
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
108242181
NCBI-ProteinID:
XP_017282351
LinkDB
All DBs
Position
LG23:complement(6945490..6961229)
Genome browser
AA seq
726 aa
AA seq
DB search
MAAAPFYFFDHLIFLFQLCALPSVHGGAYYGQKQPLQQHHQPIPQYNDGFQQQQFLGNEM
PLLPQYGNQLPLQMGKQRPQKGPTFPRGAKGPPLPLPDGQGFPEGPKGIQGPPGPMGPQG
PLGPPGQGLPGLPGKPGPPGPQGYKGVGKPGMPGLPGKPGGHGLPGPKGNLGPVGGNGAT
GLPGPPGLPGPTGLPGSSKPGGQGLPGQPGLSGEPGQNGAPGFPGVPGPKGDKGLGIPGF
PGLKGPSGPPGPPGQMGLPGNGKPGPNGVPGHHGIPGKPGPPGEPGLAGQPGERGQTGLP
GIPGIGKPGNDGFRGQPGLPGGKGETGPPGLTGPPGLPGYGKTGFPGPKGHKGHAGLPGP
SGPKGDKGQVGFPGVIGPTGLNGMPGAPGVTGLPGDIGFPGLKGEYGAGGPRGNPGAKGE
KGPSGLPGQPGHLGESGQPGPRGLQGPIGPKGEAGIRGLPGAPGAGGLPGPKGEGGVPGD
KGHTGPQGIPGLTGPGGPIGPPGLPGQKGEAGPGGNPGYPGKGNPGPPGQIGPQGSPGPS
GPPGLPGRSGPPGPPGPPGLSATYTDLVQILPHSGPYDGQSEKLKNGGEISGTNPKMPAF
TAKLSNPFPLVGSPIVFDKLLHNGNQDYNPQTGIFTCSVPGIYYFAYHVHCKGSNVWVAL
TKNNEPVIYTYDEYKKGLLDQASGSAVLPLRRGDTVYLQLPSDQAAGLYAGQYIHSTFSG
YLLYSM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcacccttctactttttcgatcatctcatcttcctgttccagttgtgcgcg
ttgccctcggttcacggtggagcgtactacggacagaaacagcccctgcagcagcaccac
cagcccataccgcagtacaacgacgggtttcagcagcagcagttcctgggaaacgagatg
ccgttgctgcctcagtacggaaatcagctgccgttgcaaatgggaaaacaaagaccgcaa
aaaggaccaacttttccgagaggagccaagggtccccctttacctcttccagatggacaa
ggtttcccagaaggaccaaaaggaattcagggcccccctggaccaatggggccacagggc
cctcttgggccaccaggacagggattaccaggtttaccaggaaagccaggcccccccggt
cctcagggctacaaaggagttggaaaacccggtatgccaggattgcctggaaaacctgga
ggccacggactaccgggaccaaaaggcaatctcggtccagtggggggtaacggagcgact
ggacttcctgggcctcccggcctcccaggtcccaccggactccctgggagttcaaaacca
ggaggtcagggtctaccgggacagccgggcctttcgggagaacccggtcaaaatggcgcc
cctgggttccctggtgttcccggcccaaagggagacaaaggacttggtattcccggtttt
ccaggtttgaaaggacctagcggaccacccggtccacctggacaaatgggtctccccggc
aatggtaaacctggccctaacggtgtacccgggcaccacggaataccagggaaaccgggt
cctcccggagaacccgggcttgcgggacaacccggcgaaaggggccaaacaggactcccg
gggattccgggaatcgggaaaccaggaaatgacggttttagaggtcaaccgggcctcccg
ggaggaaaaggtgaaacgggccctcctggtttaaccgggcctccaggtttgcccggttac
ggtaaaacaggatttccaggacctaaaggtcacaagggacacgccggacttccgggacca
tcgggcccaaaaggagataagggtcaagtagggtttccaggggtgatcggtccaaccggg
cttaacggaatgcccggcgcaccaggcgtaacgggtcttccgggtgatatcggcttcccg
ggactaaaaggagaatatggagccggaggcccaagaggaaatcctggagcaaagggtgaa
aagggaccttcgggtcttccgggacagcccggtcatttaggagagagcggacaacctgga
ccgagaggtttacaagggcccattggccctaaaggagaagctggtattagaggtttaccc
ggtgcccctggtgccggaggattaccgggaccaaaaggagaggggggagtgcctggagac
aaaggccatacgggaccacagggtattcctggacttacaggaccagggggaccaattgga
cctcctggtcttccaggacaaaaaggtgaagcaggcccaggaggtaaccctggttatcca
ggcaagggaaatcccggaccccctggccaaatcggtcctcaaggtagtcccggtcccagc
ggcccccctggacttccaggtcgatcgggaccaccagggccccccggtcctccgggacta
tcagccacatacacagacctcgtccagattctccctcacagcggcccttacgacggtcaa
agcgaaaaactaaagaacggaggcgagatcagcggaaccaacccgaagatgcccgcattc
accgcaaagctgtccaatccgttccctctggtcggttctcccatcgtctttgacaaactt
ttgcacaacggcaatcaggactacaaccctcaaactggtatcttcacttgtagcgttcca
ggaatctactactttgcttaccacgttcactgcaaagggagtaacgtttgggtggcactg
acgaagaacaacgagccggtcatatacacttacgacgagtacaaaaagggtttgctggat
caggcttcggggagcgccgtactccccttacgaagaggagacaccgtttacctgcagtta
ccttcagatcaggcggcgggactttacgccggtcagtacatccactccaccttttccggg
tacttactgtattcgatgtaa
DBGET
integrated database retrieval system
