Kryptolebias marmoratus (mangrove rivulus): 108242257
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Entry
108242257 CDS
T05608
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108242257
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108242257
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_7
SH3_1
TPR_1
Hikeshi-like_C
TPR_10
SH3_9
Motif
Other DBs
NCBI-GeneID:
108242257
NCBI-ProteinID:
XP_017282488
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All DBs
Position
LG7:14769059..14795812
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AA seq
1260 aa
AA seq
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MVLPVRLNVVRGPDHHPADEQFQDQLRGRLRLLESDSTEISLLLMELCAHLVSISSEEKV
IFVTFKTFEEIWKFTTYYKIGIIGHCMEKLLLDPTVWLSSLVEEITVDVFIQEEPFNVFY
RSILMQEGSFFASCSANQMFDSSTSGGDLYLEQGDLAQFEPPFLGSGWTVLSLMDGSRGT
APNPALEPVIPFYQWFLKTCAETVLVGGGKPDCGFPLQAARGVCLATAEYIAEGPDELSL
APGDRVIIVGFLVPCFDWFTGRMEATGEVGLVKTSLVKPCTKTFDSADIFLDGEDWKFSG
QREQTIIEESIEKLKNKFQNDASHNYKLASFCGKTDTHQAERKKNIQMILTQVKQSSESE
DCTVDNNGTQEGCKDLSPICFSVHPLEVRNKSTQDFIPLFSFLKGRDYREELGLVYGLST
EVLTSCTFTGHSDEDELIAFLDVARETAKKKQLFWTQTRLCYLLGKLCAGRSKFSQALVY
FEESLCVPQEGFADLRLLASIYSNLAAVHALQKNRDRLFAVSERLVALLLGIPDCLKSLE
ESSPLTYMVKKSILSHNQKAEARACYLLAKHHWECAEGEQAVPYLERLLVACNAAQKSWS
FSLSDGYLTLGGLYNELHLPHLSVSSAKRASLQPSVTLSDCLGSMILVLDIVDKHCGMSE
QETSVLPLVAPYLHQGLVLTKVQEAGSMYNHVLRYQLTLCLCQLFYKNKMVKHAISYLQS
FINNSPPSEPVPISVLEQNSALIWLAWLHIDNNQPCIALDILDSVLSSMPENCTTLQKGV
VLNMRGVALGSMGDQLRAAENYQAAVNICQEDGDLPNWAVAQANLGLLCLKAGAKGLAQR
YLVRAVQLFSELKEGGHEEEFASVLLELGLHYVKQELLDYGKGCYEWALLLAIKANLLDY
QLSATRHLCHLYGRESPDQCQCLIYSQHQVHILSSIGDRAQEGDALEAISQLYLSLGTNR
AYRAALDYTKSGLGIFIDLGCKEKEAYGWLKAGKIYHLLGQTELVDIYIQAAQEVALRTG
DTGFILKLLEAAGDIFLNNCQDQDKALTFYRDRALPIAVRSSSPLTRLRLCNKLTAVMLG
LKMYEEAVKVAQTAMEISVTLGDNLNERVACYRLASLYQGLEQYEMAEHYYLRCLTLCPT
PLQFDEETLFYVRVYQTLGDITFYDLKDPFDAAGYYQLALAAAVDLGNKRSQLKLCTRLA
TIYHNFLVDRELSLYFYQKARGFTAELNVKRIDISPDQHLRRMSQIKTDAQMETPDMKTV
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcctgtgagactaaatgtggtccggggccctgatcaccatcctgctgacgaa
cagttccaggaccagctgagagggagactgcgccttctagagtctgacagcacggaaatc
agtctcctgcttatggaattgtgtgctcatcttgtttccatcagtagtgaagaaaaagtc
atttttgtgacattcaaaacattcgaggaaatatggaaattcaccacttattacaaaata
ggcatcataggccactgtatggaaaagctattgttggacccgacagtttggctgagttct
ttagtggaggagatcacagttgatgttttcattcaggaggagcctttcaacgttttctac
aggagtatcctcatgcaagaaggttcattctttgcaagttgtagtgctaatcagatgttt
gacagctccacctctggaggggacctttatctggagcagggagacttagcccagtttgag
ccacctttccttggctctggttggactgtcctttccctgatggatggatctcgaggcact
gcacctaatcctgctctggaacccgtcatccccttctatcaatggtttctcaaaacatgt
gcagaaaccgttttagttggaggtgggaaacctgactgtggcttccctctgcaggctgcc
agaggagtttgtcttgccacagcagaatacattgctgagggccccgatgagctgagtttg
gcacctggtgatcgcgtcatcattgtggggtttctggtgccttgttttgattggtttact
gggagaatggaagcaacgggagaagtgggtcttgtaaagacaagtttggtaaaaccatgt
actaaaacctttgactcagcagacatctttttggatggagaggattggaagttctctggt
cagcgagagcaaaccatcatagaagaatcaattgaaaagttaaagaataaatttcaaaat
gatgcgagtcataactacaaactggccagcttttgtggcaaaactgatactcaccaagct
gaacggaaaaagaatattcagatgattcttacccaagtgaagcaatcatcagaatcagaa
gattgcactgtcgacaataatgggactcaggagggttgtaaagaccttagccccatctgt
ttcagtgttcacccactggaggtccgaaacaaaagcacacaggacttcatccccctcttc
tcttttttgaaaggacgggactacagagaggagctgggccttgtgtatggactgagtact
gaagttctcacgtcctgcaccttcacgggtcattctgatgaggacgagctgattgcattt
ctagacgttgccagagaaacagccaagaagaaacagctcttttggacgcagactcgttta
tgctatttgctgggcaagctctgtgctgggaggtcaaagttcagtcaggctctggtttac
tttgaggagtctctctgtgttccacaagaaggcttcgcggacctcaggctgttggccagc
atctactccaacctggctgccgtacatgctttgcagaaaaacagagacaggctttttgct
gtgtcagaaagacttgttgccctgctgctgggaatcccagactgcttgaaaagcttggag
gagagctcccctcttacatacatggtgaagaaatccattctgtctcataaccaaaaggca
gaggctagggcttgttatctgctagcaaagcaccactgggaatgtgcagagggggaacag
gcggttccttatcttgaaagactccttgtcgcttgtaatgcggctcagaaatcatggagt
ttctctctgagtgatggatacctgaccttaggaggtctttacaatgagctacatcttccc
catctcagtgtcagttcagccaagagagcttctctgcagccatccgttactctgtctgac
tgccttggcagtatgatattagttttggacattgtcgacaaacattgtggaatgtcagag
caggaaacctctgttctgcctctagttgctccatatttacaccaaggcctagtgctgacc
aaggtccaggaagctggaagtatgtataaccatgttttgcgctatcagctcaccctttgt
ctctgccagctgttttacaagaataaaatggtaaaacatgccatcagctatttgcagtcc
ttcatcaacaacagtccaccctcagagccggtccctatttcagttcttgaacagaacagt
gccctcatctggttggcatggcttcacattgacaacaatcagccctgtatcgcattggat
atactggactcagtcttgtcttccatgcctgaaaactgtactacccttcaaaaaggggtg
gttctcaacatgcgtggagtggctcttggaagcatgggagaccagctgagggcagcagaa
aactaccaggctgctgttaacatctgccaggaggatggggatttgccaaattgggctgtg
gctcaagctaaccttggtttgctgtgtctgaaggctggagctaaaggattagcacagagg
tacttggtcagggctgtgcagctcttctctgagctcaaagaaggaggtcatgaggaagaa
tttgcttctgtgctgcttgagttgggactgcactatgtaaaacaggagctcctggactat
gggaaaggatgctacgagtgggctctgctgctggccatcaaagccaacctgttagattac
cagctcagtgcaacaagacatttgtgccatctgtatggacgtgagagcccggaccagtgc
cagtgtttgatctacagccaacaccaggtccacatcctgagcagcataggagacagagcc
caggagggagacgcactggaggctatcagtcagctctacctcagcctcggcacaaatagg
gcctaccgggcagctctcgactacaccaagagcggtctgggtatttttattgacctgggc
tgcaaggagaaggaagcctatggctggttgaaagcaggaaagatctaccacctactgggc
caaacggaacttgtggacatttatattcaggcagcccaggaagtcgctctcagaaccgga
gacaccggcttcattctgaagctcctagaagctgcgggagatattttcctgaacaactgc
caggaccaagacaaggctctaaccttctacagggatcgtgcgctgcctatagcagtgagg
agcagcagccctctcacccggctgaggctatgcaacaaactgactgcggtcatgttgggt
ctcaaaatgtacgaagaggctgtgaaggttgctcagactgcaatggagattagtgtcact
ctaggtgataatctgaatgaacgggtggcctgttaccgtttggcttctctgtaccagggt
ctggaacagtacgaaatggctgagcattattacctgaggtgtctgactctctgcccgact
cctctgcagtttgatgaggaaactctgttctatgtcagagtgtaccagacgctgggagac
atcacgttctatgacctgaaggacccgtttgatgctgcagggtactaccaactagccctg
gctgcagctgttgaccttggtaataagaggtctcagttgaagctgtgcacccgcctcgcc
acaatttaccacaacttcctggtcgatcgggagctctccctctacttttatcaaaaggca
agagggtttacagcagagctgaatgtgaaaaggattgacatctccccagatcagcatctg
aggaggatgtctcagatcaagacagatgcacagatggagacaccggacatgaagacagtt
taa
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