Kryptolebias marmoratus (mangrove rivulus): 108242269
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Entry
108242269 CDS
T05608
Symbol
sf1
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108242269 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108242269 (sf1)
Spliceosome [BR:
kmr03041
]
Complex A
Other components
Complex A specific factors
108242269 (sf1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
108242269
NCBI-ProteinID:
XP_024864016
LinkDB
All DBs
Position
LG7:15690820..15704940
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AA seq
677 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGGNGLMPTPGPPGTFPSIQSYQAPIPNTSFA
PPHQFNPGFSAQIQQQAAVGSGIMPNDFGQKKPRKKSRWSSETPDQKTVIPGMPTVIPPG
LTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRK
KIEEERHSLITEMIALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNT
LKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMDNVKKAVEQIR
NILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNTEPRSITNTTLCTKCG
GAGHISSDCKYTSTFAAQRAPGAEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSG
SQAGAPRTSGPNSNQPPPNRPPWMSSGPTENRNYQGMHGGPTGPGGPHNFPPPMPNMGGP
PMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPPPSNQPPPPPSAP
LPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTTSSPCTGTLPPWQQPQQPAASAAQPPLP
MGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNFVMLNMGVPG
MPPFSMPPAPPPPPPQN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaactcctctgggaaagttgcacccgagtatcggtgcaaaa
cgaggatttgacgccgggcctggcgcgggaggcaacgggctgatgccaacaccgggacct
cccggcacgtttccctccatacagagttaccaggcccccatcccgaacacatcttttgct
ccgccgcaccagttcaacccagggttttctgcccagattcaacagcaggccgccgtggga
tccggaatcatgcctaacgatttcggccagaagaaaccaaggaaaaagagtcggtggagc
agcgagacgcccgaccagaagaccgttattccgggaatgcccactgttattccccctggg
ctcacacgagatcaggagagagcatatatagtccaactgcagattgaagacctgactcgt
aaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctctccg
gagcccatctataacagcgagggcaaaaggctaaacacccgcgagtatcgcacccgaaag
aagatcgaagaggagcgtcactcccttatcacagaaatgattgccctcaaccctgacttc
aagcctcctgcagactacaagcctccagccaccagagtcagcgacaaggttatgattcct
caagatgaatatcctgaaatcaacttcgttggtttgctaatcgggccacgtggtaatact
ttgaagaacattgaaaaagaatgctgtgctaagatcatgattcgaggaaaaggctctgtg
aaagaagggaaggttggtcgaaaagatggacagatgctgccaggagaagatgagcctctg
cacgcgctggtcacggccaacacgatggataatgttaagaaagctgtggaacagattcgt
aacatcctgaagcagggcatcgagacgccagaggatcaaaacgacctccgaaagatgcag
ctgagggagctggccagactcaacggcaccctgagggaggatgataacaggatccttcgt
ccttggcagaacactgagccacgcagcatcaccaacaccaccctctgtaccaagtgtggt
ggagcaggccacatctcctctgactgcaagtacaccagcacgtttgctgcccagagagca
ccgggtgctgagccccctcagtcagcacaggacaaggctcggatggacaaggaatatctg
tccctcatggctgagctgggggaggccccagtcccctcttctggcgggggacactcgggc
tctcaggcaggagctcctcgaacctctggccccaacagtaaccagcccccaccgaaccga
cccccctggatgagctctgggcctacagagaacaggaactaccagggcatgcatggagga
cccacaggccccggaggaccacacaactttcctccccccatgcccaacatgggtggacca
cctatgccccctaaccctaatggcctgcctccaccttggatgcagccccctccgcctcct
atgggccagggacctggaccacatggacacccgatgggtctgctgccccctcctatgggt
atgatgccaccgccacctcctccacccagcaaccagccccctcctcccccttctgctcct
ctgccaccatggcaacaacaggctccgccccctcctcccaccagcagcatggcaacaagt
acaccactaccctggcaacaaaataccaccaccaccacctccagcccgtgcactgggacc
ttgcccccgtggcagcagccgcagcagcccgccgcctccgccgcccagccgccgctcccc
atgggaaccccgtccatggtgccgcctcctccgggcgtccagcccccgctgcctcccggc
gcccccccgcctccccctccgccgcctccgggctctgctggcatgatgtacgccccgcct
ccgcccccgcctcccatggacccttctaactttgtcatgttgaatatgggggtacctggc
atgccacctttcagcatgcctcccgccccgcctccaccgccccctcagaattag
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