Kryptolebias marmoratus (mangrove rivulus): 108242320
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Entry
108242320 CDS
T05608
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108242320 (rnf20)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108242320 (rnf20)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108242320 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
ATG16
zf-RING_UBOX
Bacillus_HBL
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
zf-ANAPC11
NPV_P10
Motif
Other DBs
NCBI-GeneID:
108242320
NCBI-ProteinID:
XP_017282591
UniProt:
A0A3Q3AQX4
LinkDB
All DBs
Position
LG9:16469407..16477343
Genome browser
AA seq
1020 aa
AA seq
DB search
MSGQKRPADPSGPSFSGAPPEKRREREGEDGGPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENIRL
IIRRYDQASSEPEKSPSGEGRSLKPETPEPDGDSNQERAKDRGHQGETTNSFLATLASST
SEEMEAELQERVESSQKQASRVVEIYKSLKDTVDQLKSELDSGHEGSLKQVICKLSSLLT
SENELLQQLTEDLKQKHSHMTSESRSLGRATNKADQRVTELQARIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELVDNRLDELQ
KLQQDLQNVQQENNNMKTELMSRAEGLVKETSEYRCLQSQFSVLYNESLILKAQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVKKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQLKGEVVKYKLRLRETQAELNQLLASKGSSILQSQSSTE
MDVKEETISPTTPAVSGEPVVKTELDDSSTPSSTGVAVKAESGVEPEAAVKEEEKEEKKE
KEEKKDILKKEEKEREREKEKDRERAPRSSSSIIMKEEKEKPGSSSQPEELTGDRLSVVG
GSKRKEMEQLKIVRTELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTIGTAERELTLRTQALDMNKRKAQESALQSEELRGQLEQVQQ
KLKLVRAEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDEILNEEISE
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtcctgctgaccccagcggaccctcgttctccggagccccgccg
gagaagcggagggagcgggaaggagaggacggaggtcccggtgtcagcgccgcggccggg
gggagcaccgcggtggagacggtcatcaaactgggaggagtgtccaactcagaagagcaa
gacatcaaagctctgcaagctaaaaaccgaaagctgggagaggctcttgaccaaagacag
gtgattgaggacgagctgcgagagcgaattgagagactggagacccggcaggccactgat
gacgccagcctgctcatcctcaacagatactggaatcagtttgatgaaaacattcggctc
atcatcaggcgctatgaccaagcaagcagcgaaccggagaaatctccatcaggtgaggga
cgaagcctgaagccggaaactcctgaacctgatggagactctaaccaggagagggccaaa
gacagaggacatcaaggagagaccaccaactcttttctggccacgctggcgagcagcacc
agtgaggagatggaggcagagctccaggagcgggtggagtccagccagaagcaggccagt
cgtgttgtggagatctacaagagtctgaaggacaccgtggatcaactaaagtcagagtta
gactctggacacgaggggagtctgaagcaggtaatttgtaagctgagctccctcctgacc
agtgaaaacgaacttcttcagcagctgacagaagacctcaaacagaaacacagtcacatg
accagcgagtcccggtctctgggtcgggcgactaacaaagcagaccaacgcgtcactgag
ctgcaggctcggatcgaggagctccagtgggacatggagaagatccgtcgccgagagaac
agactgaacgcacacctgagcgagatcctggagagggtaaacagcaaaggatataaagtg
tgcggagaggccagcagtgtttgtggaaccatcactattaacaagagaaagtttgaggaa
atgaacagcgagttggaggagaacagggagctggtggataatcgccttgacgagctgcag
aaacttcagcaggacctgcagaatgttcaacaggagaacaacaacatgaagaccgagctg
atgagccgagctgaaggtctggtcaaagagacgtccgagtatcgctgcctgcagtcccag
ttttctgtgctctacaacgagtccctgatcctcaaggctcagttagatgagacgcgcgcc
cgcctcaacacgactcggacggcacggcttcggcagctggagcacatggagaacgacgag
gtggctctgcagaggaaggttcgcacggaagtgtttcagctggaggacacgctggctcag
gtcaagaaggagtacgagatgttgcgtatagagtttgagcagactcttgcagccaacgag
caagcaggccccatcaaccgggagatgcgtcacctgatcagcacactgcaaacgcacaac
cagcagctgaagggagaggtggtgaaatacaagctgagactacgagagacccaagctgag
ctcaaccagctcctggcgtcaaagggcagctccattctccagtcacagtcgagcacagag
atggacgtgaaggaggagacgatctcgccgacaactccagctgtttctggagaacctgtg
gtgaagacagagctggacgactcctcaacacccagcagcaccggcgttgcagtaaaagca
gagtccggtgtcgaaccagaggctgcagtgaaggaagaagaaaaagaggagaaaaaggag
aaggaagagaagaaagacattctaaagaaagaggagaaagagcgggaacgggagaaggag
aaggacagagagagggccccccggagcagcagcagcatcattatgaaggaggagaaggag
aagccggggagcagcagccaaccggaggagttaaccggagatcggctctctgtggtcgga
ggatccaagaggaaggagatggagcagctgaagatcgttcgaacagagctgaagaaagcc
caggagtcccagagggagatgaagctgctgttggacatgtaccgctcagcaccgaaggag
cagagggacaaagtccagctcatggctgcagagaagaagaccaagtcagaggcagaggag
ctgcggcagaggctgcgggagctggaggagagggagagaagggagggcaagaaaatggcc
gacgaagaggctctgaggaagatccgttctgtggaggagcagatcgacatcctcaacaag
aagttgtccatagccaaacaggaggaggacgcgctgctgagcgagatggacgtgacgggc
caggccttcgaggacatgcaggaacagaacattcgcctcatgcagcagctcagagagaaa
gacgacgccaacttcaagctgatgagcgagcgaatcaagtccaaccagatccacaagctt
ctgaaagaggagaaggaggagctcgccgaccaactcctcaccttaaagactcaggtggat
gcacagctgcaggttgtgaggaagctcgaggagaaggagcgcctcctgcagggcaccatc
ggcactgctgagagagagctgacgcttcgaacgcaagctctggacatgaacaaacgcaag
gctcaggagtctgcgctgcagtcggaagagttgcggggtcagctggagcaggtgcagcag
aagcttaagttggtccgagcggaggtcgttgagaacagcatctccagggaaaaagagtcc
ttcaacgcccggcgagctcaggaggacatctccaaactgaggagaaagatcgagaaggcc
aagaaaccggccgagaaaatcagcaacggagacgagatcctgaatgaagaaattagtgaa
tacaaggctcgtctgacgtgcccgtgctgcaactctcgggtgaaggacgccgtcctgacc
aagtgcttccacgtcttctgcttcgagtgcgtcaagacgcgctacgacacccgccagagg
aagtgccccaagtgcaacgccgcctttggagccaacgacttccatcgcatttacatcggc
taa
DBGET
integrated database retrieval system
