Kryptolebias marmoratus (mangrove rivulus): 108242321
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Entry
108242321 CDS
T05608
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108242321 (katnb1)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108242321 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Katanin_con80
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
PROPPIN
Beta-prop_IP5PC_F
Tricorn_2nd
Ge1_WD40
WDR54
RMC1_N
VPS8_N
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_NUP159_NUP214
Cytochrom_D1
PD40
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
108242321
NCBI-ProteinID:
XP_037835914
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All DBs
Position
LG15:complement(30446184..30466365)
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AA seq
694 aa
AA seq
DB search
MAAASSTKTSWRLQEFEAHSRSVSCLALGKSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHRNPVECVQFNTSEEQVVTGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPFGNFL
ASSSMDTIIKLWDIRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDGTVKLWDLFQGK
TITEFTSHSAAVNSVQFHPNEYLLASGSSDRSIKLWDLEKFTMIGTLEGDTSAVRCILFS
PDGSCVYSGSSDSLRVFGWEPDRCFDVVPVGWGKVSDLAVCNQQLIGVSHQLSNVSSYVV
DLKRVKRSGGAVIQGIIQDSKPLTEPTEPRAAALRRNYDRPTTSCSSHRVRQRSEADRRS
PEGERQSPSEDETEEKQSSAEIHNAEEYKEIFQPKSAISRTPPRISEPFPAPPEDESVMV
IGRQLKDMMPPFPDKQKAPPLAISTPIQRVEPTVVSCAKCPTPSLNPSPSSQPAPPTQIN
KAKPKQQPRIISSTRNEPIGLNVADFLPSSANRHAADLSDDEALTQIKKGHDTMCVMLSS
RRKNLQTVRTVWAREDIKNALDSAVSMNDLSIMVDVLNIINLQPFLWKLDLCTSVLPQID
KLLQSKYESYMQTGSTSLKLIMKHFWTLISETLKASPAVGVDITREERHLKCCECYKHLK
NLSNIVKNRAGQVGRHGSAFKELQLLMTPLHEAL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccagcagcaccaagacctcatggcgactgcaagagtttgaggctcactca
cggagcgtttcctgtctggctctggggaaaagctccggccgcctactggccacaggagga
gaggactgcagggtcaacatctgggctgtcagcaaggccaactgcatcatgagtttgacg
ggtcacaggaacccagtggagtgtgtccaattcaacacatcagaggagcaagttgtgacc
gggtctcagtctggatccatacgagtttgggacctggaggctgccaagattttacgcact
cttatgggacacaaagccaacatcaccagtctgggttttcatccatttggaaactttctg
gcctccagctccatggacacaatcataaagctgtgggacatccggaggaagggatacgtg
ttcaggtacaagggtcacactcaagcggtgagaagcctggccttcagtccagatgggaag
tggttggcctcagcaagtgatgatggcaccgtaaagctctgggacctgtttcaaggaaaa
accatcacagagttcacatctcactctgcagctgtaaacagtgtccagtttcaccccaat
gagtacctgctggcatctggcagctctgacaggagcatcaagctttgggatctggaaaag
ttcacaatgattggcacattggaaggagacacatctgcagtcaggtgtatcctctttagc
ccagacggctcctgtgtgtacagtggttcctcagactcccttcgggtgtttggctgggag
cccgaccgctgttttgacgtggttccagttggttgggggaaagtgtcagacctagctgtt
tgtaaccaacagttgattggcgtgtctcaccagctgtccaatgtctcatcgtacgtagtc
gacttgaagagagtgaagaggagcggcggtgctgtgatccagggaataatccaggacagc
aagcctcttacagagccaaccgagcccagggcagcagcacttcgtcgcaactatgacaga
cccacaacctcctgcagctcacacagggtgaggcagcgctcagaggctgacaggcggagt
cctgaaggagaaagacaaagcccaagtgaagacgagactgaggagaaacagtcatcagca
gagattcacaacgctgaagagtacaaagagatattccagccaaagagcgctatttctcgc
actcctcccaggatatcagagccgtttcctgcccctcctgaagatgagagcgtgatggtg
attggtcgacagctgaaggacatgatgcctccttttcctgacaaacagaaggctccaccc
ctcgccatctccactcctatccagagggtagagcctacagtggtgtcctgtgcgaagtgc
cccaccccctctttgaacccctctccttccagccagcctgccccgcctacccagatcaac
aaggccaaacccaaacagcagcccagaattatttccagcaccaggaatgagcctattgga
ctgaatgtggccgacttcttgccgtcctcagccaaccgccatgctgctgacctgagtgac
gacgaggctctgacccagatcaagaagggtcacgacaccatgtgtgtgatgctgagcagc
cgacgcaagaacctgcagacagtccgaaccgtgtgggcccgagaggacatcaagaacgct
ctggactctgctgtctccatgaatgacctgtccatcatggtggacgtcctcaacatcatc
aacctgcagccatttttatggaaactggatctgtgtacgagcgtcctccctcagattgac
aagctgctgcagagcaaatacgagagctacatgcagactggctccacatctctgaagctc
attatgaaacacttctggactctgatctcagaaactctgaaggcctcgccagccgtcggt
gtggacatcacacgagaggagcgacatctaaagtgttgcgagtgctacaagcacctaaag
aacctgagcaacatcgtgaagaacagggcggggcaggttggtcgccacggcagcgccttc
aaggaactgcagctgctcatgacgccgctccacgaggcgctctga
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