Kryptolebias marmoratus (mangrove rivulus): 108242466
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Entry
108242466 CDS
T05608
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108242466 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108242466 (hbs1l)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108242466 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
108242466
NCBI-ProteinID:
XP_017282791
UniProt:
A0A3Q3FV24
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All DBs
Position
LG19:complement(12339413..12363689)
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AA seq
699 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCISPATANQFIYSRRERQAPKEEPLEEEEY
EVEDIPMSPTVDHNFDPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAVKHGFDPQRALDA
VLSEDTRTATVSRSANEELPSACRVGQDTSPLPQRAKQEAAAEKAKSRDVSHSKLDSEVV
PKVARMTVSGKKQTMGFEVPSAGENGLAATSVRRGGSPENAAVPESASKCPETPSKGSNG
DEASAGATPGRSSGKTRQAINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLG
NVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDA
PGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAV
NKMDQVNWQQERFQEITSKLGHFLKQAGFKDSDVFYVPTSGLSGENLTVRSSVPELTSWY
SGASLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKILAMPP
NETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINAGCVFCHPKEPIRACTRFRARI
LLFSIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAVVEV
QTQRPVALELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaacgtccgaggttacaactacgacgaagattttgaagatgacgac
atgtacgggcagtctgtggacgacgactactgtatatcaccagcaacagccaatcagttc
atctactcacgtcgagagagacaagcaccgaaagaggagcctttagaggaggaagaatat
gaagttgaggatattcccatgtcccctaccgtcgaccacaactttgaccctcttgatcaa
gcaaagctgtactcgtgcctggaccacatgcggactgtgctgggggacgcagtgccggac
tctgtcctgacccaggcggccgttaaacacggctttgacccgcagagggcactggacgcg
gtactgtccgaggacaccagaacggccacggtgagcagaagcgcaaatgaagagctgcct
tcagcttgccgagttggccaggacacgtcgcctcttccacaaagagccaaacaggaggcc
gcggctgagaaagctaaaagcagagacgtgtctcacagtaagctggattctgaagtggtc
cccaaagtggcccgcatgaccgtttccgggaagaagcagacgatggggttcgaagttccc
agcgcaggcgagaacggcctcgccgccacttccgtccgacgaggcggcagccccgagaac
gcagccgtccccgagtctgcctcgaagtgtcccgagacgccgtccaagggatccaacggg
gatgaggcctccgccggcgccacaccgggacgctcctctgggaagacgcggcaggcgatc
aacatcaaggccgaactggagaagagacaagggggaaaacctctgttaaacttggtggtt
ataggtcacgtggacgcgggtaagagcacgctgatgggccacctgctctatctgctgggt
aacgtcaacaagcgcaccatgcacaagtacgagcaggagtccaaaaaggcgggaaaagcc
tccttcgcctacgcctgggttctggatgaaaccggcgaggagagggacaggggcgtgacg
atggacgtgggcatgaccaagttcgagacgaactccaaagtggtgactctgatggacgcc
ccgggacacaaagacttcattcccaacatgatcacaggcgccgcgcaggcggacgtggcg
gtgctcgtggtggacgccagccggggggagtttgaggccggcttcgaagccggcggtcag
accagagagcacgcgctgctggtgcgctcgctgggcgtcacccagctggccgtcgccgtc
aacaagatggaccaggtgaactggcaacaagagcgattccaagaaatcacctccaaactg
ggccatttcctaaagcaggccggattcaaggactcagatgttttctacgtccccaccagc
ggcctgtcaggagaaaacctcaccgtcaggagttcagtaccggagctcacgtcttggtac
tctggagccagcctgctggagcagatcgatgcgttcaaagcccctcagaggtccgtagac
aaacctttcagactgtgcgtctcagacgtgttcaaagaccagggttcaggcttctgtgtt
acagggaagattgaagctggttttattcagactggagacaaaattctggcaatgccgccc
aatgaaacttgcactgttaaaggaattaccctccacgatgaggctctggactgggctgca
gcaggagatcacgtcagcctcaccgtcaccggcatggacatcatcaagataaatgccggc
tgcgtgttctgccacccaaaggagccgattcgggcctgtacccggttccgagccaggatc
ctcctcttcagcattgaggttcccatcacgcaaggcttcccagtgctgctgcattaccag
acggtcagcgagccggccaccatcaggaaactgatcagcgttctgcacaagagcagcggc
gaggtgctcaagaagaagccaaagtgtttgagtaaaggcatgaacgctgtcgtggaggtc
cagacccagaggccggtggctttagagctctacaaggactacaaagaactgggccgcttc
atgctgcgatacgtgggctccaccatcgccgcgggggtcgtcacggagatcaaagaatga
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