KEGG   Kryptolebias marmoratus (mangrove rivulus): 108242514
Entry
108242514         CDS       T05608                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108242514 (helq)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     108242514 (helq)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    108242514 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 TPR_28 DUF7898 DNA_pol_lambd_f DUF4332 bMERB_dom
Other DBs
NCBI-GeneID: 108242514
NCBI-ProteinID: XP_024864167
UniProt: A0A3Q3AYC6
LinkDB
Position
LG14:9733090..9744602
AA seq 1012 aa
MSSGRLEVKIKRVCARKRSRGVLKTHLTPVRKKGGSLGSPLCPLRSTMVDNRAVEYCSDN
EDLFGDYDSILEDSSLLAKLDDAEQNERLRAADQKHFTNLQPSKDGAWKQSCENVLTDSI
LDEFRDEPFEDLPGSQLQFQEQAKRSRLPDGDKTSTPQSASRMVEAGRETSTEDKTRSHS
GARRSVADLLKRTMLGNAAAPFGVSRTVALKEAVVSEEISVAMQAMETLSAETTDLGPFF
GLPSKVKELMHKLRGIQNLYDWQEMCLNLDCVQQRKNLIYSLPTSGGKTLVAEILILREL
LCRKKDCLFILPYISLVQEKVRGLASFGLELDFMVEEYAGSKGRFPPVKRRNKRSLYVAT
IEKAHSLVNSLIETSRLEDLGLVVVDELHMLGDGSRGAVIEMTLAKVKYMSKTTQIVGMS
ATLGNIKDLQTFLSAENYTNDFRPVQLKEYVKVNDTIYEVDPKEDNCFRFSRLLNFKYSS
AMQKIDPDHIIALVTEVIPAHSCLIFCPTKKNCENVAGMICRYLKEQFLQHRGDEKAVLL
RELKDSGNGSVCSVLRRTVPYGVAYHHSGLTSEERKLVEEAYSNGVLCLLACTSTLAAGI
NLPARRVILRSPYVATDFLKRSQYKQMVGRAGRAGIDTVGESILILQEKDKNMAKDLMCA
PMENCYSNLMHDEGKGVLSLILSLIGLNIASSPQQIQEFLRGTLLFVQQQQLCLEKSLWD
VAWQCVDMLKEKDLVTVSAADSLSPTLQITKLGRAAYKGSVDLTYCDVLYKDLSKGLEGL
LLNSYLHLVYLVTPYDLIPQCKPDWMIYFGQFALMSAGEQKMSAAIGVPESFVARKAAGQ
AVKKNMNLGVVRRLYLALVLFSLLKETDVWRVAERFQLSRGFAQTLLSSTSAFCSCVLHF
TEELEEFWPFRALLTELTRRLSYCVKAELIPLMEVAGVMESRAKQLYNAGYKTLSHLANA
DPAVLCKTIENLYKKQANLMVASAKMLLNEKAAALQEEVDELLTLPDDLPQL
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgagttctgggaggctcgaagtcaaaataaaacgagtttgcgcgagaaagaggtcgcga
ggcgttctgaagactcacctgacacctgtccgaaagaaaggaggcagcctcggctccccg
ctatgtcccctcagaagcaccatggtcgataatcgggctgtggagtactgcagtgacaat
gaagatttgttcggcgactacgacagcatccttgaggacagctctctcttggcgaagttg
gacgatgcagagcaaaatgagaggctgcgagcagccgaccagaagcactttacaaatcta
cagccgtctaaagacggcgcatggaaacagtcctgcgagaacgtcctcaccgactccatc
ttggacgagttcagagacgaacccttcgaggacttaccaggcagccagctgcagtttcaa
gaacaagcaaaaaggagccgactgccggatggagataaaacctccacacctcagagtgcc
agcaggatggtcgaggctgggcgagaaacgagcacggaagacaaaaccaggagccacagc
ggagcgaggaggagcgtggcggacctgctcaaacggacgatgcttgggaacgcagcggct
cctttcggcgtttctcggacagttgcactgaaggaggcggtggtctctgaggagatcagt
gtcgcgatgcaggccatggagacattatcagctgagacgactgaccttgggcctttcttt
ggactccccagcaaagtgaaggagctgatgcacaaactgagaggaattcagaacttatat
gactggcaggagatgtgtctgaacctggactgtgttcagcagaggaagaacctgatctac
tctctgcccaccagcggagggaagactctggtagcagagatcctcatcctcagagagctg
ctttgcaggaagaaggactgtctgttcatcttaccgtacatatcgctggttcaggagaag
gtgcgtgggttagcgagctttggcctggagctggacttcatggtggaagagtacgctggc
agcaagggcaggtttcctccggtgaagagaagaaacaagagatcgctgtacgtcgctaca
atagagaaggcccacagcctcgtcaactctctgatagagaccagcaggctggaggacctg
gggctggtggtggttgatgagcttcacatgctgggtgatggcagcagaggggctgtgatt
gaaatgactctggccaaagtcaagtacatgagcaaaacaactcagatcgttggaatgagt
gccacgctgggaaacattaaggacctgcagacgtttctgagcgccgaaaattacacaaac
gacttcaggcctgttcagctgaaagagtatgttaaagtgaacgatacaatctatgaagtc
gacccaaaagaggacaactgcttcagattctcgcgtctgctcaactttaaatattccagc
gccatgcagaagatcgacccggatcacatcatcgctctggtgaccgaagtcatcccagca
cactcgtgtctgatcttctgccccaccaagaagaactgtgagaatgtggcagggatgatc
tgcagatatctgaaagagcagttcctgcagcaccgcggcgatgagaaggccgtcctccta
cgggagctgaaggacagcgggaatggctcggtgtgctcggtgctcaggaggactgttccg
tacggcgtggcctaccaccacagcgggctgacctcagaggagaggaaactagtggaggag
gcctactctaacggcgtgctttgcctcctcgcctgcacctccaccctggctgccggcatc
aacctgcctgcccgcagggtgatcctgcgctcgccatacgtggccacagacttcctgaag
aggagtcagtacaagcagatggtcgggagggccggtcgagctgggatcgacactgtggga
gagagcatcctcatcctgcaggagaaggacaagaatatggccaaagacctgatgtgcgcc
ccgatggaaaactgttacagcaacctgatgcacgatgaagggaaaggcgtgctgagcctc
attctgtcactaatcggattaaatatcgcctcgtcgccgcagcagattcaggagttcctg
cgcgggacgctgctgtttgtgcagcagcagcagctgtgtttggagaagagtctgtgggac
gtggcgtggcagtgcgtcgacatgctgaaggagaaggacctcgtcaccgtcagcgccgcg
gactcgctcagtccaacgctgcagatcaccaagttggggagagctgcttacaaaggttcg
gtggatctgacctactgcgatgttctgtacaaagacctgagtaaaggtctggagggcctg
ctgctcaacagctacctgcacctggtctacctggtgaccccctatgacctgatcccacag
tgcaagcccgactggatgatttacttcggacagtttgccctcatgtccgctggagagcag
aagatgtctgctgccatcggtgtgcccgagagttttgttgcaagaaaagctgcaggacag
gcggtgaagaagaacatgaaccttggggtggtgaggcggctgtacctcgctctcgtgctc
ttctctttgctgaaggagaccgacgtgtggcgcgtggccgaacgcttccagctgagccga
ggcttcgcccagacgctgctcagctccacctcggccttctgctcctgcgtgctgcacttc
actgaggagctggaagagttctggccgttcagagccctactgaccgaactgacccggcga
ctgagttactgcgttaaggccgagctgattcccctgatggaggtggcgggagtcatggag
tcaagagcgaagcagctgtataacgctggctacaagacgctgtcccacctggccaacgct
gaccctgctgtcctctgcaagacgatagaaaacctctacaagaagcaagccaacctgatg
gtggcctcagccaaaatgcttctgaatgaaaaagctgccgcgcttcaggaggaagtggac
gagctgctgacactgcctgatgacctgccgcagctttaa

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