Kryptolebias marmoratus (mangrove rivulus): 108242613
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Entry
108242613 CDS
T05608
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X6
KO
K21072
A-kinase anchor protein 28
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108242613 (arhgef28a)
Membrane trafficking [BR:
kmr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108242613 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
PHD
Ank_2
Peptidase_M8
PHD_2
PH_13
C1_2
Motif
Other DBs
NCBI-GeneID:
108242613
NCBI-ProteinID:
XP_017283059
LinkDB
All DBs
Position
LG14:6370155..6454518
Genome browser
AA seq
1735 aa
AA seq
DB search
MEVNRKVPLYGQVESCVKIRERAPEGAQFYIVAQGSKLTHVTAAKQGNDDRTLYFTVPGH
DCVEVVSVTAYCYTEDQVHPCEGKAYLEYLRDVPQKAAEYLSANKVQFGPQSYQEVLQRF
STLSRTAGEDLCGGLLDYSEQIERSSRDDLRLLDETITLALSSLDFPAQWKDTDRQPEEA
AEHDPKESLLHVAVRLGLVHLARFIVHQPRGQSALMSPNEEGETPLQLAQRDGRHSVFRM
LSKPRPSRPAVGPLPGVWCLWSDSSCMLRFCPKTGSVILTVRQPPGSCPQDAVMVLQEKL
HDLRIHKLINMLRVNSEGTKTDEDEGHLSHEGVSKDLVDENLLVDSVFEEHPTFFLNDEA
SEEENSSSLSVNEHLMKTDEVPNQFDQHETDGLMFLMNSSEQLTQADDVKFRVGGATRDS
TGTDGTLWDTEDLFLATDTPPPCLGDSVPCSLSLSSGDHTRQNHTSLAEQNYQRDSPIIE
TCDLSLVALEVDSEDERAEPQSPLSPLLSDVGKSEVRRETAPDLTCTRSQSASTCEPVSK
ELSEEGVRLRSYSYSYPKISFLPSRHPRDNNTSEISHDGVLHSVSHSRSLLQALSLSKST
LSLSLLHPGKQRASSMSDQSHEKREVRFRKRAQSADDESSMELAESLQHLTLSEFLKEIE
EEELEKSSIPTKSESEKYKVIRTFSFLKGRMSSTRNKSKGKGKDREAKDRQLNGHRFASG
SCLGPTLCVVCNKPASGKDLLYCSGCTVIVHKGCKESVPPCMKRPQDKYALTMVKNKTAS
LPQNFTVRDSPPQSVIHISSSQPVMIPKERKETVTPSCSLSGSLPTSDSLLSESSETESD
VLKLNSQSEEFLPTPVSSVSNESFFGDDCVDSNIYSHSDISADSADYESESWSLTVEHKF
CKKQDKQVVKRQDVIYELMQTELHHLQILHIMAKVFRRGMKEEVQLDKEAVERVFPCLDQ
LLLFHHAFFAAMKERRQNSAQPQGHRNYLIQTVGDILLQQFSDENGEKMKQVYGDFCSRH
NEAVSFFKDLQQHNKRFQSFIKQQVNNSLVRRREIPECILLVTQRITKYPVLLERILHYT
EEETEEHANLSKALAQIREVIATVDLRVSEYERHQRLQEVWNRMENRSTTKLKSGKTFRK
QDMTGLGQMLRHEGLLLWKTATGRFKDVLALLLTDTLIFLQEKDQKYTFAIVDQKPPVIP
LQKLIVREVANEERGMFLISASSAGPEMYEVHTSSKEERNSWMRLIREAVESCPEEQEEY
SSESEEEKRAAEARFQKILKLQESLTSQDQQICSCLEEKLQIYADLSTLRRAPDTSLVEP
RLLVQPHSEELPQAVGLLAAALKEAEILKTALSSKTPPSQIQDPDSLFPATLSESSSETS
RVSPENLEGSRSDTFILQSAADSQKHEPNNFKVAQSVHTLTQLLYSLQAAVTIQDSYYEV
QRLLLQESGRPSSRAQYLHLPSLRGTTLLEQEKQRNLEKQKEEVAAAHQLQERLRQEKES
WERERQARESQQEEQESRLEEREKQCQLAVEKLRREREELDEQLEEYQQSLERLREGQRS
VERDRERLENQHKLLQTWKHGRQSSLPTVIPHMVIPLNEQQDSSPSRSRAHTGNGSVFVN
EAAFAGSSFNNRHSRHNSNDPNAHNCFNTLLARSNSRQPPVVAPPHSQHSQGWTMGTEYF
CSPAGQIGLQHPTSGHSCNGETWMSTASGADPYLVLPLPGDHHVDLVSLETDSDQ
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacagaaaggtgcctttatatggacaagttgagagttgtgtgaagatacga
gaaagagctcctgaaggtgcacagttttacattgttgcccaaggctccaagcttacacac
gtgacagcagcaaaacaaggcaatgatgatcggactctttacttcaccgttccaggccat
gactgtgtggaagtcgtgtctgtcacagcttactgttatacggaggatcaagttcatcca
tgtgagggtaaagcataccttgaatacctcagagatgttccccagaaggctgcagagtac
ctaagtgcaaacaaggtgcagtttggccctcagagctaccaagaggttctacagaggttt
tctacgttatctcggacagctggtgaggatctttgtggtggactgttggactacagcgaa
cagatagagcgaagttcaagagacgacctgaggctgctggatgagacgatcacactggcc
ctgtcgagcttggatttccctgcgcagtggaaagacactgaccgtcagccagaagaagct
gcagaacacgaccccaaagaaagcctccttcatgttgcagtgcgactgggtttggtccac
ctagctcgtttcatagttcaccaaccgagaggtcaaagtgcattgatgtcacctaacgaa
gaaggtgaaacgccgctccagctggctcagagggatggacgacattctgtgttcaggatg
ctgagtaagccaaggccttcaagacctgcagtcggccctctgccgggggtttggtgcttg
tggtccgacagctcctgcatgctgaggttttgtccaaaaacgggttctgtaatcctcact
gtgcgtcagcctcctggtagctgtcctcaagatgccgtcatggtccttcaagaaaaactg
cacgacctcagaatccacaaactgatcaacatgctcagagttaattctgagggaaccaag
acagatgaagatgaaggtcatttgagtcacgaaggtgtcagcaaggatctggtggatgag
aatctgctggtggacagtgtttttgaggagcatcctaccttctttttgaatgacgaagct
agtgaggaagaaaactcgtcctcactgtctgtaaatgagcatctcatgaagactgatgaa
gttccaaaccagttcgatcagcatgaaaccgatggtttgatgttcctgatgaacagcagt
gaacagctgactcaggctgatgatgttaagttcagggttggtggtgcaacgagagacagc
acagggactgatgggaccttatgggacacggaggatctttttcttgcaactgacacccct
ccaccctgtttaggagactcagtaccttgctccctctccctctcatctggtgatcacaca
agacaaaaccatacttcccttgctgagcagaactatcagagagacagcccgataatagaa
acctgcgacctcagtctggtggctctggaagtagacagtgaggacgagagagcggagcca
cagtctccactttccccgctcctgtcagatgttgggaaaagtgaagtcagaagggaaaca
gctcctgatctcacctgcactcgcagccagtctgcctcaacatgtgaacctgtatcaaaa
gaactgagcgaggagggggttcggttgcgctcctattcctactcatatccaaagatcagc
ttccttccctcccgtcatcctcgggacaacaacacatcagaaatcagccacgatggcgtt
ctccacagtgtcagccacagccgatctctccttcaggccctctctttgtctaaatccacc
ttgtctctgtctctgctgcaccctggtaagcagagagcctccagcatgtcagatcagtct
catgagaaaagggaggtcaggttccgtaaacgcgcccagtctgctgacgatgagagtagc
atggagctggcagagtccctccaacatctcacactgtctgagtttctcaaagaaattgaa
gaggaagagttggaaaagagcagcattccaactaagtcagagtcagagaagtacaaagtc
attcggaccttcagttttctcaagggcaggatgtccagtacccgcaacaagagcaagggg
aaagggaaggacagagaagctaaggacagacagctaaatggacatcggtttgcatcaggc
tcctgtttaggccccacgctgtgtgtggtgtgtaacaaaccagcttctggaaaggacctt
ctgtattgctcaggctgtactgttattgttcataagggctgtaaggaatctgttcccccg
tgcatgaagagacctcaggataaatatgccttgaccatggtgaaaaacaagaccgcatcc
ctcccacagaacttcacagtaagagacagtcctcctcagtctgtgatccatatttcttct
tctcagcctgtcatgatcccgaaggagaggaaggaaactgtgacgccatcgtgttctctc
tctggaagtctccccacgagcgacagtctgctcagtgagagctcagagacagaatctgat
gtcctgaaactgaacagccaatcagaggagttcctgccaactccagtgtcctctgtctct
aatgagtcattctttggagatgactgtgtggactcaaatatctacagtcacagcgacatc
tctgctgactctgcagattacgagtctgagtcatggagtctgacagttgagcacaagttc
tgcaagaagcaggacaaacaagttgtcaaaaggcaggatgttatctatgagctgatgcag
actgagctccaccatctacagattctgcacatcatggccaaggtttttcggcggggaatg
aaggaagaagtgcagctcgacaaagaagctgtggagcgggtgttcccctgcctggaccag
ctgctcctcttccatcatgccttcttcgctgccatgaaggagcgacgacaaaactctgcc
cagccccaaggacacaggaactacctaatccagacagttggagacattttgctccagcag
ttttcagatgagaatggagaaaaaatgaagcaggtttacggagacttctgcagtcgtcac
aatgaagccgtcagctttttcaaagatctccagcaacacaacaagagatttcagagcttc
attaagcaacaagttaataactctttggtgcgacggagagaaatcccagagtgcatcttg
ctggtgacccaaagaattacaaaataccctgtcttgctggagaggatcctgcattacact
gaagaggaaacagaagagcatgccaacctttcaaaagctctggctcagatccgagaagtg
atagcaaccgtggatctgagagtcagtgaatatgaacggcatcagaggttacaggaagtg
tggaaccgcatggagaaccgcagcacaaccaagctgaagagtgggaaaaccttccgcaag
caggacatgacggggctgggacaaatgctcagacacgagggcctacttctgtggaagaca
gccactggtcgatttaaggatgtcctggcactgcttctcacggacacactcatcttcctc
caagaaaaagaccagaagtatacatttgccatcgtggaccagaaacctcccgtcattccg
ctgcagaagttaatagttcgggaagtggcgaatgaagagagggggatgtttctgatcagc
gcctcgtctgcagggccggaaatgtacgaggttcacacttcatccaaagaggagcgaaac
tcctggatgaggctcattagagaagctgtggaaagctgtccagaggaacaagaggaatac
tcaagtgaatctgaggaggagaaacgagctgctgaggctcgtttccagaaaatcctcaag
ttacaagagagtttgacaagccaggaccagcagatctgctcttgcctggaggagaagctg
cagatctatgcagacctctccactctgaggagggcgccggacacctcgctcgttgaacca
cggctgctggtccagccgcactcagaggagctgccgcaggccgtggggctgctggctgca
gccctgaaagaggctgagatcctcaaaaccgcgctgtcatctaagacccctccgagtcag
atccaggacccagattctctgtttcctgctacactctcagagtccagctcagagacctcc
agagtctcacctgagaaccttgagggcagccgatccgacacgttcatccttcagtctgca
gctgactcacaaaaacatgaaccaaataacttcaaggtcgctcaaagtgtccacaccctg
actcagctcctgtacagtttgcaggctgctgtaactatccaggactcttactacgaggtc
cagcggctcctactccaagagagtgggcgcccttcgtcccgtgcccagtatctgcacctt
ccgagccttcggggcaccaccctgctggagcaggagaagcagcggaacctggagaagcag
aaggaggaagtggcagcagctcatcagctccaggagcgactgcgccaggagaaagagagc
tgggagcgcgagcgccaggcgagggagagccagcaagaggagcaggagagcaggctggag
gaacgggagaagcaatgccagctggctgtggagaagctgaggcgggagagggaggagctg
gatgagcaactcgaggagtaccaacaaagtctggagcggcttcgggaaggccagaggagc
gtggagagggatcgcgagcgtctggagaaccagcacaagctgctccagacctggaagcat
gggcggcagagcagcctgccgactgtgattcctcacatggtcatccctctgaatgaacaa
caggactcttcaccaagtcgctccagggcgcacactggtaacggctccgtgtttgtgaac
gaggctgcgtttgcaggctccagctttaacaaccgccactctcgccacaacagtaatgac
cccaatgcacacaattgtttcaacaccctgctggcccggtctaacagcagacagccccct
gtcgttgccccccctcacagccaacactctcagggatggacgatgggcacagaatacttc
tgcagccccgccggacagattgggctgcagcacccaaccagtgggcacagctgtaacggt
gagacatggatgtccacagccagcggagctgacccatatcttgtgctgccacttcccggt
gaccatcatgtggacctggtttccttggagacggacagcgatcagtag
DBGET
integrated database retrieval system
