Kryptolebias marmoratus (mangrove rivulus): 108242643
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Entry
108242643 CDS
T05608
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
kmr04145
Phagosome
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108242643 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108242643 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108242643 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108242643 (tap2a)
Enzymes [BR:
kmr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
108242643 (tap2a)
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108242643 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_29
AAA_15
AAA_16
Motif
Other DBs
NCBI-GeneID:
108242643
NCBI-ProteinID:
XP_017283096
UniProt:
A0A3Q3BQX1
LinkDB
All DBs
Position
LG5:2552087..2558184
Genome browser
AA seq
718 aa
AA seq
DB search
MAGKPITTFCKVFALTSAVCFDLFFFYASGSVLIHGAFGHLGRLWLFAALRWSVITVTAL
LILGDLKPLRIRFITAHSLLPAVLESGTRALHGEDSQCSQVVDVRCWLMLAGASLGAALF
WEITIPDSDEEADSKEQKQKSRVLFMRVLYLYKPDYLLLLGGLVFLSLAVICEMFIPFYI
GRVIDILGSHYQQNEFLTALLFMGLYSVGSSVSAGCRGGVLLCAISSFTCRIKVMLFEAL
TKQEIGFFETIKTGEITSRLSRDTTLTGRTVCLNVNVLLRTFIKTMGMIFLMMNLSWKLT
FLVLMETPITGLIQNIYDTHYQRLSQAMQDSMAHTNDAANEVVFGIRVVRSFNAEKHEAE
RYDDRLMETHTLKTRRDTVRAVYLLARRFTGLGMQVFILYYGRLFIQMGQMTTGNLVSFI
IYQSDLGDNIRTLTYIFGDMLNSVMAAGKVFEYLDRKPQVSTDGKLKPDQMNGHIRYRSL
NFSYPSNPNKTVLQDFSLELKSGQMTALVGPSGEGKSTCVSLLERLYEPQDGEILLDGEP
LKSYDHKYFHKKIAVVSQEPVLFSGSVRDNITYGLPGCSLDEVEEAARKANAHEFIQQLK
KGYDTEVGESGSQLSKSERQRIGIARALIRRPKVLILDEITSSLDSESENKIQQALASCP
DQTLLVIAHRLKTIEKADQIVVISGGQVKERGTHQELMELKGSYHKLREEVFTEGGAP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaacctataacgacattttgcaaagtttttgctttaacttcagcggtttgc
ttcgaccttttcttcttttacgcatccggatctgtattaatccacggcgcgtttggacat
ctcggccgtctgtggctctttgcagctctgcgatggtcagtcatcactgttacagctctg
ctcatcctcggagacctcaaaccgctgcggatccgttttataacagcacacagcctgctt
ccagcggtgttggagagcggaaccagggctcttcacggggaggacagccagtgcagccag
gtggtggatgtgcgctgctggctcatgttagccggagcgtctctgggtgctgcgctcttc
tgggagatcaccatcccggacagcgatgaagaggctgacagcaaggagcagaaacagaag
tccagagtcctgttcatgagggtcctctacctttacaagcccgattatctcctgctgctc
ggagggctggtgttcctgtctctggcagtcatctgtgagatgttcatcccgttctacata
ggcagagtgattgacatccttggaagtcattaccaacaaaatgaatttctcactgcactc
ctcttcatgggcctgtactctgtgggaagttcagtaagtgctggctgcagaggaggtgtc
ctactttgtgccatcagctcatttacatgcagaatcaaagtgatgctgtttgaggctttg
accaaacaggaaatcggattctttgaaaccataaagacaggtgaaatcacatctagactg
tccagagacaccaccctgacaggaaggacagtatgcttgaatgtcaacgtgctgctgagg
acgttcatcaagacgatggggatgatcttcctgatgatgaatctgtcatggaaactcaca
ttccttgtactgatggaaacacccatcaccggtctcatacagaacatctatgacacacac
taccagaggttgtcccaggccatgcaggactcgatggctcatacaaatgatgctgcgaat
gaggttgtgtttggtattcgtgtggttcgaagtttcaatgcagaaaagcacgaggctgaa
cgctatgatgatcgattaatggaaacacacactctgaaaacccgccgggatactgtgagg
gctgtttacctgctcgcacggaggtttacaggtctggggatgcaggtttttattctgtat
tacggcagactttttatccagatgggacagatgaccaccgggaacctggtttctttcatc
atctatcagtcagatctcggagacaacatcaggactcttacctatatctttggtgacatg
ctgaactcggtgatggctgctgggaaagtgtttgagtacctggacagaaaacctcaggtc
agcacagatggaaaactcaaaccggatcagatgaacggacatatcagataccgcagtcta
aacttctcctatccttcaaaccccaacaaaactgtgctgcaggacttttccttggagctg
aagtcaggtcagatgacagctcttgttggtccatctggagaaggaaaaagcacctgtgtg
agtctgttggagcgattatatgagcctcaagacggagagatcctgctggatggagagcca
ctgaaatcctatgatcacaaatacttccacaagaagattgctgtggtgagccaggagcct
gttctcttctccggctctgtcagagataatatcacctacggacttcctggatgctcattg
gatgaagttgaggaagcggcacgcaaagccaacgcccatgaatttattcaacaactgaag
aaaggctatgatacagaggtgggcgagagcggcagccagttatccaagagtgagaggcag
cggatcggcatcgctcgagctctgatcagacggccgaaggtcctcattctggatgaaata
accagctctctggactctgagagtgaaaataagattcagcaggccttggcgagctgcccg
gatcagactcttctggtgatcgctcacagactgaagaccatcgagaaggcagatcagatc
gttgtgatcagcggaggtcaagtgaaggagcgggggactcaccaggagctgatggagctg
aaggggagctaccacaaactgagagaggaggtgttcactgagggaggagcgccgtga
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integrated database retrieval system
