| Entry |
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| Name |
(RefSeq) CCR4-NOT transcription complex subunit 3
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| KO |
| K12580 | CCR4-NOT transcription complex subunit 3 |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108242679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:kmr03019]
108242679
Messenger RNA biogenesis [BR:kmr03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108242679
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108242679
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG5:complement(3568078..3595337)
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| AA seq |
913 aa
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVEAIKKIKDDVEYYIDSSQDPDFEENEFLYDDLDLDDIPQSLVA
TSPPGHSHLEDDIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSLLSSSSSSSSSVSGLTSSSMISMATIAGGGSSVSGGSSHHSSISNTSAGSYS
NATQQPPHPSVQQQAKNSASSSAPISNSSASTNSHSASSASSPPNASTQGLLTSNSQPQA
PSGPTSTSNSLGLSLGLSLGKGIMSSSITTSPMSGGLGLSGMPASLSTMAGLLSSSTPTP
YAQAAASGTGSSGLPGSLGGVSTTTTNSALGTIGSGSITVGGPTSLTGGMLGAVPGVGSI
GSGILGLGSGQSGIPVQGPSLVSQSPVGSLAPGSGIGVIGSNGGSSGSTGSGVVGGSSSL
SVRPPSQQKQNGSTSYSAVVADSTTDSALNSATQSQSSQSSSLTSTANQLKDTGPSLLGS
LSLSSSSPSPASYSEAKTSSLLNGPLSYSPPDTIKPQESLSSLKSISDQAALSSGIEGDV
ASLHLTPDIFPSSTTAPSGPSSAPQPSLSEVSILPSLGVCPLGPVPLSKDQLYQQAMQEA
AWMHMPHPSDSERIRQYLMRNPCPTPPFHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEG
TKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGF
TFEYRYLEDRDLQ |
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| NT seq |
2742 nt +upstreamnt +downstreamnt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggagtggagcagtttgaagacatttggcaaaagcttcacaatgcagccaatgcaaaccag
aaggagaaatatgaagctgatctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaagaggcagctaatagagaac
cgcaaactcatagaaacgcaaatggagcggttcaagatcgtggaaagagaaaccaagacg
aaagcctattcgaaagaagggcttggtctcgcccagaaagtggacccggcacagagggag
aaggaggaagtcgggacgtggctgacgaacacgatagacacgctgaacatgcaggtggac
caatttgagagcgaagtggagtccctttcagtccagaccaggaaaaagaaaggagacaag
gagaagcaggatcggatcgaggagctgaaaaagttcattgagaagcatcggtaccacatc
cggatgctggagacgatactgaggatgctggacaacgactcagtgcaggttgaagccatc
aaaaagatcaaggacgatgtggagtactatatagactcatcgcaggatccagactttgag
gagaacgagttcctttatgacgacctggacctggatgacattcctcagtcgctggtcgcc
acctccccgccggggcactcgcacttggaggacgacatcttccagaactccagcagcacg
cccacctccaccacgtcatcctctcccatccccccttcgcctgccacttgcactacggag
aactcagaagatgacaagaagagggggcgttccacagacagtgaagttagccagtcacct
gtaaagaacgggaatccctcctctttgttgtcttcctcttcctcctcttcttcttccgtc
tcgggactgacctcatcctctatgatctctatggcgaccatcgctggcgggggaagcagc
gtctctgggggcagcagtcatcacagcagcatctccaacacttcggctggcagctacagt
aacgccacccagcagccgccccacccgtcggtgcagcagcaggccaaaaactcagccagc
tcttcggctcccatctccaactccagcgcctccaccaacagccacagcgcctcctcagca
tcctcgccgccaaatgccagcacacaggggcttctcacttcgaactcccagccccaggct
ccctcggggcccacgtcgacctccaacagccttggcctcagtctgggactctctctgggg
aaaggcatcatgtccagctccatcaccaccagcccgatgtcggggggcctcggcctgtca
gggatgccggcatctctgagcaccatggcaggccttctgtccagctccaccccaacccct
tacgcccaggcagccgcctccggcacgggcagctcaggcttaccgggctccctgggaggt
gtcagcactacgacaaccaacagtgcgttgggcaccattggcagtggaagcatcacagtc
ggcgggccgacgtccttgacaggaggcatgcttggtgcggttccaggagtgggcagcatc
ggctcgggaattctgggtttgggttctggtcagtcggggatcccagtgcagggaccttcc
ctggtgtcacaaagtcccgtgggaagtttagctccaggaagtgggatcggtgttatcgga
agcaacggcggcagttcggggtcgacaggaagcggagtagtgggagggagctcgtcgctg
tcagttcgacccccgagccaacagaagcagaacggtagcaccagttacagtgctgtggta
gcagacagcacaacagactccgccctcaacagtgccacccaatctcaaagcagccaatcc
tcatcgttgacctccacagccaatcagctgaaggacactggtcccagtttactgggttct
ttgagtttgtcgtccagctccccgtcaccggcctcctacagcgaggctaaaacatcaagc
ctgctgaacggaccactgtcctactcaccgcccgataccatcaagccccaggagtctctg
agcagcctcaagtctatctccgaccaagcagcactcagctcagggatcgagggagatgtg
gcctccctgcaccttactccagacatcttccccagcagcactacggccccgtcaggccca
tcatcagcacctcagccctcgctgtcagaggtcagcatcctcccttcgctgggggtctgt
ccgctggggccggttcccctttccaaagaccagctgtaccaacaggccatgcaggaggcc
gcgtggatgcacatgccccacccgtccgactccgagagaatcaggcagtacctgatgagg
aacccgtgccccaccccacctttccaccaccagatgccaccgccccactccgacactgta
gagttttaccagaggctctccacagagactctctttttcatcttttactacctggagggc
actaaggcccagtatctggcagccaaagccctgaagaaacaatcgtggaggttccacaca
aaatacatgatgtggtttcagaggcacgaagagcccaagaccatcactgatgagtttgag
cagggaacatacatttactttgactacgagaagtggggccagaggaagaaggagggcttc
acgttcgagtatcggtacctagaggatcgagacctccagtga |
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