Kryptolebias marmoratus (mangrove rivulus): 108242725
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Entry
108242725 CDS
T05608
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108242725 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108242725 (nvl)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108242725 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_33
AAA_14
NPHP3_N
TIP49
Mg_chelatase
AAA_28
RNA_helicase
AAA_17
nSTAND3
AAA_18
TsaE
NACHT
Rad17
ABC_tran
ATPase
Vps4_C
NB-ARC
Viral_helicase1
AAA_3
Zeta_toxin
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
108242725
NCBI-ProteinID:
XP_017283232
UniProt:
A0A3Q3AS82
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Position
LG22:complement(12064626..12082964)
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AA seq
821 aa
AA seq
DB search
MKNRGGGWIDSRLKQRVEQYLASSDCEYVDLSTMALDLQKRYRLDYGRRNKTAFRIQVEK
VYEAVKEDSELNELEAKHLAKRAKSSHNDTGDGSSDSEESSDTEEDRVPDNSSNNLLTSL
YRKSTSAPSSPASNTNPTPSAGTLVSSGGFFIDKGKGSTGSSVLIDLCEEESDSKAATDA
STLESQKSHKKSRKRAKSSAEAAEFRTPNKKAKSKSPELQFPTVKFEDVGGNEETLTEVC
KLLVHMRHPEVYQHLGMVPPRGFLLHGPPGCGKTLLAQAVAGELELPMLKVSAPELVSGV
SGESEQKLRELFDLAVSSSPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSL
AVTAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDESARLRILKTLCRKLTLPEDFD
YQQLARLTPGYVGADLMALCREAATAAVNRVLLEVSAPPQSQPQGSAEEPTGGRDQAEAG
DHLQQGELWKLLNLLKAAETLSEEELAGLSILMSDFQGALSRVQPSAKREGFATVPDVTW
ENVGALQEIREELTMAILAPVRSPQQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESG
LNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDELDALCPRRSGHESGASVR
VVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPCPADRHAILLT
VTKGGTKPQLEQDVSLEQVAFDERCDCFSGADLTALVREASVNALKAYLKSQHCGPTQAS
DSPADIRVSRQHFEDAFRTVRPSVSKKDQLMYEKLRESLSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgaggtggtggctggatagactctcgactcaaacagagagtggaacagtat
ctggcctccagtgactgtgagtatgttgatctttcaacaatggccctcgaccttcaaaaa
cgatacagattggactacggcagaagaaataagacggctttcagaattcaagtagagaaa
gtgtacgaagcggtcaaggaggactctgagctgaatgagctggaggccaaacacttggcg
aagagagccaaaagcagccacaacgacacgggggatggcagcagcgactcagaggagtcc
tcggacacagaagaagaccgcgtcccggacaactcttccaacaaccttctcacgtctctg
tatcgtaagagcacctctgctcccagcagtccagccagcaataccaaccccactcccagc
gcagggacactggtgtcctctggaggcttcttcattgataagggcaaaggctccacgggg
agcagcgtcctcatcgacctgtgtgaagaggagtctgacagtaaagcagctacagacgcg
tcgacgctggaatcgcagaagagccacaagaagtcgagaaaaagggcaaagagctcagcc
gaagcggccgagtttcgcaccccgaacaaaaaagctaaatcgaaatctcctgagctgcag
tttcccactgtgaagttcgaagatgtgggaggtaacgaggagactttaacggaggtgtgt
aagctgttggtccacatgcgtcaccccgaggtgtaccagcacctgggcatggttcctccg
aggggcttcctcctccacgggcctcctggctgtgggaagacccttctggcccaggctgtg
gctggggagttggagctgcccatgttgaaggtttctgccccggagctggtgtccggagtg
tcaggagagtccgaacagaagctgagggagctctttgacctcgctgtgagctccagtcca
tgtatcctgttcatagacgagatagatgccatcaccccgaaaagagaggtggcctctaaa
gacatggagaggaggattgtcgcccagctgttaacctgcatggatgacctgaacagtctg
gcagtgacagctcaggttctggtcatcggggccaccaacagaccggactccctggacccg
gccctccgcagagctgggcgcttcgacagagagatctgtctgggtatccccgacgagtcg
gctcgtctcaggattttaaagacgctgtgtcggaagctgacgctgcctgaagatttcgac
taccagcagctggcacggctcacaccgggctacgtaggagctgacctcatggctctctgc
cgtgaggccgccacggctgctgtgaacagggttctgctggaggtgtcggcacctccacag
agccaaccgcagggttctgctgaagaaccgacaggaggcagagaccaggcggaggctgga
gaccatctccagcagggggagctgtggaagctgttgaacctgctcaaagccgccgagacg
ctgtcggaagaggagctggcgggcctgtccattctcatgtccgacttccagggcgccctg
tccagggttcagccttcagccaagagggagggctttgccacggttcccgacgtcacctgg
gagaacgtgggagccctgcaggagatcagagaggagctcaccatggccatactcgctccg
gttcgctctccgcagcagttcagagccttaggcctcagcgctccatccggcgtgctgctg
gctggacctccagggtgtggaaaaaccctgctggccaaggcggtggccaatgagtccggc
ctcaacttcatctctgtgaaaggaccagagctgctcaacatgtacgtgggcgagagcgag
cgggccgtcagacaggtcttccagagaggacgcaactcggctccgtgcgtcatcttcttc
gacgagctcgacgccttgtgtccgcgccgttcaggccacgagtcaggagccagtgttcga
gtcgtcaaccagctcctcacagagatggacggcttggagagtcgacggcaggtcttcatc
atggctgccaccaacagaccagatatcattgaccctgccatcctgaggccaggtcgtctg
gataaaaccttgtacgtggggctgccgtgtccagcggatcgtcacgccatcctgctcact
gtaacgaagggggggaccaaaccccagctggagcaggacgtcagtctcgaacaggtcgcc
ttcgatgaacgctgcgattgcttttccggagctgacctgacggcgttggtgagggaagca
tctgtgaacgccctgaaggcctacctgaagtcccagcactgtggtcccacgcaggcctcc
gactccccggctgacatccgagtgagccggcagcactttgaggacgccttcaggacggtt
cggccgtccgtgtcgaaaaaggaccagctgatgtacgagaagctcagagagtccctcagc
agatga
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