Kryptolebias marmoratus (mangrove rivulus): 108242745
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Entry
108242745 CDS
T05608
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108242745 (gle1)
03015 mRNA surveillance pathway
108242745 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108242745 (gle1)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108242745 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
108242745
NCBI-ProteinID:
XP_017283254
UniProt:
A0A3Q3A2Q3
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All DBs
Position
LG1:complement(29040083..29049939)
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AA seq
710 aa
AA seq
DB search
MPSETQRWETLNALKNLPKGKITFDPHWSERGEHILAGCKETLSLSSHTGVILERIDSVS
LQKSSFLDSSVDSEETPASVSSTGSISDLNNKITAFSSTLCFKNEQKQAGSEEVKDGSPD
VSEVSSPVSPPGISLLSPKAMETAGRIIWFENEQREKAKAALRQRQEMQEKQVAAVANAE
SEQLKRFEELMELKQRQEFQSMRDMMDRETKESMGRQEKLKEEQRHRIRILNLRLREAEQ
QRLREAELEKQRQTEGRERLRNLNSVQEEILQLNRLLEPSTQSDSDLPASGLDSYSTRGN
QLCSQVSEVVRKTAEGEFPSSEDMLIAERALQEMRALMQQMQEEVAKAQEKKKEQEQEEE
SRKQKELQARQAAQKKAEQAAKEKAQKKGLQNSAEDGTIRWYKELQDSAARCAQSFEQLN
SPKDAQTKKLKLELQKAATIPVSQISTNSGSQLREIFDRIDKLLSGRAVVSGGKSVSTSQ
HPQSLAFVSFKLAEKFVKQGEEEVASHHEAAFPIAMVASGIWELHPQVGDLILAHLHKKC
PYAVPHYPPMKDGTPVEEYQRILGYRVDDSGAEGQDSFLKRMSGMIRLYAALIQLKWPYS
SKQGSAPHGLNHGWRWFAQMLNMEPLADITATLLFDFLEVCGNALIKQYQLQFWKLIVLL
KEEYFPRIEAVTSSGQMGSVIRLKQFLETSLNNRQISPPKGQLSSSFWRS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaaactcaacgatgggaaactttaaatgcgttaaagaatttaccgaaagga
aaaatcacattcgacccgcactggtcggaaagaggagagcacattttggcaggttgtaaa
gagaccctcagcttatcgtcgcacaccggagttattttggagcgaatcgactcggtgtcc
ctgcagaagtcctccttcctggactccagcgtcgactccgaggagactccagcctcggtt
tcctccactggatccatcagtgacctcaacaacaaaatcactgcgttctcttcaacttta
tgtttcaagaatgagcagaagcaggctggtagtgaggaggtgaaggatggaagtccagac
gtcagtgaagtttccagtcctgtatccccgcctggcatttccctgctgtcgcccaaagcc
atggaaaccgccgggcgaatcatctggttcgagaatgagcagcgagaaaaggccaaggcg
gcactccgccagcggcaggagatgcaggagaagcaggtggcggcggtggcgaacgccgag
tcggagcagctgaagcgcttcgaggagctgatggagctgaagcagcggcaggagttccag
agcatgagggacatgatggacagagaaactaaagagagcatgggccgtcaggagaagctg
aaggaggagcagcgacacagaataaggatcctcaatctgcgtttgagggaggcggagcag
cagcgtctccgggaggcggagcttgagaagcagcggcagacggagggccgagagaggctg
cgtaacctcaacagcgtccaggaggagattctgcagctcaaccggctgctggagccgtcc
acgcagtccgactcggacctgccggcgtccggcctcgactcctacagcacccgcgggaac
cagctgtgctcgcaggtgtcggaggtcgtgagaaagacggcagagggggagtttcccagc
tcggaggatatgttgatcgcagagcgagctctccaggagatgagggcgctgatgcagcag
atgcaggaggaggtggcgaaggctcaggagaagaagaaggagcaggagcaggaagaggag
agcaggaagcagaaggagctgcaggcgcggcaggcggcgcagaagaaggcggagcaggca
gccaaagaaaaagcacagaaaaaagggctgcagaacagcgctgaagacggcaccatcagg
tggtacaaggagctgcaggactctgctgctcggtgcgctcagtccttcgaacaactcaac
tccccaaaggacgcccagacaaagaaactgaaactggagctccagaaagcggccaccatc
cccgtcagccagatctccaccaactccggatcgcagctccgagaaatcttcgaccggatc
gacaagctgctgtctggacgggctgtggtgtccggcgggaagtccgtgtccacctcgcag
catcctcagagcctggcgttcgtcagcttcaagctggcggagaagtttgtgaaacaaggt
gaggaggaggtggcgtctcaccacgaggcagccttccccatcgccatggtggcctctggg
atctgggagctgcacccccaggtgggagacctcatcctggctcacctgcacaagaaatgt
ccgtacgccgttccacactaccctccgatgaaggacggcacgcccgtggaggaataccag
aggattctaggttaccgcgtggacgattctggagccgaaggtcaggacagtttcctgaag
aggatgtctgggatgatccgactctacgccgctctgatccagctgaagtggccctacagc
tcgaagcaagggtctgcacctcacggcctgaaccacggctggcgctggtttgctcagatg
ctcaatatggagcctctggcagacatcaccgcaacgctgctgtttgactttctggaggtt
tgcggcaacgcgttgattaaacagtaccagctccagttctggaagctcatcgtgctgctg
aaggaggaatacttccccaggattgaagccgtgaccagcagtggacagatgggctccgtg
atcagactgaagcagttcctggagacgtccctgaacaaccgacagatcagtccgcccaaa
ggccagctgagctcctcgttctggaggtcgtga
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