Kryptolebias marmoratus (mangrove rivulus): 108242751
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Entry
108242751 CDS
T05608
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108242751 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108242751 (si:dkey-13n15.2)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108242751 (si:dkey-13n15.2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA_2
Motif
Other DBs
NCBI-GeneID:
108242751
NCBI-ProteinID:
XP_017283265
UniProt:
A0A3Q3EMH6
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Position
LG1:complement(28359486..28369327)
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AA seq
988 aa
AA seq
DB search
MMDAPAPNQSQLWAIQNGWPPAGPPGPLCNPLPSFQQLGLGSLPHRLQASGSDPAASSDR
NNVYYDVQYTVHSQQSFPHPLHTVPATSRGANVPPCSLPLLNEGPQPAPLHPTHSPYQAS
SPQSQPLHTYPGVLNAPRSPTGNHLPVSPPGIGRTVPQPASDWVHVGSSVGYNHHKVASP
ASPIQQQPHWMLSALPGGTNFDPNAAPQEGSLTPQSPNSESRYGLDPKLLPSAVKVMEED
KAEWDGRVFVSERLSQLPPLATTPCVVEDRGNASPSAIRSTTYCVPCEGQAALLSRLPLG
ALLTPLVQQTAPVPLCRDTDCVVGCGWCGASMCPEMSWQDCGQRFYCPFCGKLSEVSWQH
YQPTKGPAGVRVDEDRRPELSLGSYEKLHSEKGEAAALLLAIDVSASALRGGHLEFVTQQ
IHTLLASLKRQEGRRSADVRVGLITYDSRVHLYDLGPHLSRPHMLVVTETEDLQLPVRDG
LLVSLTDCLDSMNSVLQLIPQFSAESDDSGGVPIQLPVRAGLAVLQGLKCPGKLLIFHSA
ALIETGNTNSSSGFFGANKPKTIFQPSDQAISLAKECVRQGCGVHMFVLSQQDVGGAWPG
HIPYLTGGALHTYSYLQGELDRERLGADLKRVVETDTGFAAELRIFVSKDLRVSGCYGLF
VPGPSPGHITMATVDERTTLAAELTHSRALDEARGAAIQAVLTYSSQTGERRTRVHTLTL
RCSRHLQDTFRNYQAQTLLTFYCKKMYCAVLERPLQELREELQTDVTEALASYRKHCCSS
SVSAGQLVLPQFLRALPVYVNSLRKSEVLLPGLRSSVHQRLQQHCQVLSLDTCGTVRHFY
PQLLPLPRSADASEPPNLEEALRCTAASLEPGALYLIHAPLALLLWVGSQVPACTLSALF
NTSCFASLPSGETKLPALETPLSVSVRSLIDALSSQAPCARKLLVVKQGDTCEEVLQRHL
VEDKSPNGGASYADFLYHLHVNSVRLLQ
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcccccgcccctaatcagagtcagttgtgggcgatccagaatggctggcct
ccagctggacctccgggaccgctctgcaatcctctgcccagctttcagcagctcggtctg
ggatctctgccccaccgcctgcaggcatccgggagtgaccctgccgcctcttcagacaga
aataacgtttattacgatgtgcagtacactgtacacagtcagcaaagctttcctcatcct
ctccacacagttccagccacaagccgaggagcgaacgtgcctccatgttctcttccactt
ctgaacgaaggcccccaaccagcgccgctgcatcccactcatagcccttaccaagcatca
tctcctcagtcccagcctcttcacacgtacccgggtgtcctgaatgcacctcggtctcca
actggaaaccatcttcctgttagtcctccggggattggacgaaccgtccctcagcctgcg
tctgactgggtccacgtgggctcttctgttggatataatcatcacaaagttgcctcaccc
gcctcccccatccagcagcagcctcactggatgctttcagcgctccctggaggaaccaac
tttgatcccaacgcagctccacaggaaggaagtttgactccacagtctccgaactctgag
tcccgttatggtctggaccccaagctgttacccagtgctgtgaaggtgatggaggaggac
aaggcagagtgggacgggagggtcttcgtctcggagcgtttgtcccaacttcctcctctg
gcaaccactccatgtgttgtggaggacagaggaaatgcgagcccgtctgcgatccgctcc
accacgtactgcgtgccgtgtgagggtcaggcggcgctgctcagccggctgccgctggga
gctctgctcacccctctggtgcaacaaacggcgcccgtgcctttgtgcagagacacagac
tgtgttgttggttgtggttggtgcggagcgtccatgtgtccagagatgagctggcaggac
tgtggacagaggttttactgtcccttctgtggtaaactcagtgaagtgtcctggcagcac
taccagcccaccaaaggacccgcgggggtccgggtcgatgaagaccggagacctgaactc
agtttgggctcgtacgaaaaactccactctgagaagggggaagctgctgcactgctccta
gcgatagacgtgtcggcctcggcgctgagaggaggacatttagagtttgtaacgcaacag
atccacacactgctggcctctttgaaaaggcaggaaggccggcgttcggcagacgtccgt
gtcggtttgatcacgtatgacagcagggtccacctgtacgacctcggaccccacctgtcc
cgccctcacatgctggtcgtcacggagacagaagacctgcagcttcctgtgagggacggc
cttctggtgtccctcacagactgtttggacagcatgaacagcgttttgcagctcattcct
cagttcagtgcggagagtgacgactccggaggagttcccatccagcttcctgttcgagcc
gggctggctgtgctgcagggtctgaagtgtccggggaagctgctgatcttccactctgct
gctctgatagagacaggaaacacaaactcttcctcagggttcttcggcgccaacaaacca
aagaccatcttccagccgtctgatcaggccatctcgttggccaaggagtgcgtccgtcag
ggatgcggtgttcacatgtttgtcctctcccagcaagatgtgggcggggcttggccgggg
cacattccataccttacaggtggagccctgcacacctacagctacctccagggcgagctg
gacagagagcgtctcggcgccgatctgaagagggtcgtggagacggacaccggctttgcg
gcagagctcagaatatttgtcagcaaagatttgcgtgtgtccggttgttacgggctgttc
gtgcccggtcccagtcctggacacatcaccatggcaacagtggatgagaggacaacgctg
gctgcagagctgacacacagcagagctctggatgaggcgagaggagcagccatccaggcg
gtcctgacctacagctcccagacaggagagaggaggaccagagttcacactctgacctta
aggtgctcacgccacctgcaggacactttcaggaactaccaggcccaaacgctgctcacc
ttttactgcaagaagatgtactgtgccgtgctggagcgccctctgcaggagctgagggag
gaactgcagacggacgtaaccgaagcactggcgtcttaccgcaaacactgctgctcctct
tccgtgtcagctggacagctggttcttcctcagttcctgcgagcgctccccgtttacgtc
aacagtctgaggaagagcgaggtgctgctgccgggcctgaggagctccgtccaccagagg
ctgcagcagcactgccaggtcctcagcctggacacctgcggcaccgtcagacacttctac
ccccagctgctgcctctgccccgctcagctgacgcctccgagcctccgaacctggaggag
gcgctgcgatgcactgctgccagcctggagcccggcgctctgtacctgattcacgctccc
ctcgccctgctgctctgggtgggcagccaagtcccagcatgcactctgagcgcgctcttc
aacaccagctgctttgcctccctgccctccggagagaccaagctgccggctctggaaact
ccgctctccgtcagcgttcgatccctcatcgacgcgctcagctcccaggcgccctgcgct
cggaagctgctggtggtgaagcagggtgacacctgtgaggaggtgctgcagcgccacctg
gtggaagacaagagtcccaatggaggcgcgagctacgccgacttcctgtaccatctccac
gtgaactctgtgcgactcctgcagtga
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