Kryptolebias marmoratus (mangrove rivulus): 108242829
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Entry
108242829 CDS
T05608
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108242829 (cdhr1a)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Cadherin related
108242829 (cdhr1a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
108242829
NCBI-ProteinID:
XP_017283425
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Position
LG22:14868760..14880580
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AA seq
873 aa
AA seq
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MASFFRMKNEKLLNLSLLFVFVNACFAQADFAPYFYDNGPYSDNGNLALFSLSEDTPIGT
QIYYLNGTDPEGHEVRYGLSVDPGSKEYFRINPKSGSITLVEKLDREKQDSIDFNISITD
GKSKVVEKVTIFVMDANDEKPEFQNLPAIIDVVETAESGSSIYKVEAVDRDTGSGGSVTY
YLQTPQSNLFAIDRHSGVLRIKSGETLDYEKTKTHFVIVIAKDGGGNFNGKEQFLSSSST
LTINMIDAQDTPPSFIGTPYFGYVYEVSKPGSEIFTVSAEDGDVGNPNPVQYSFDEGDDG
VFGINETSGCISLLSPPVYLKREIFNIKVRASEVSPEGQLLDYGVTTVVIRVVDLNNNPP
TFYGENGPQSIFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLIGPGRMLRVVPQ
TVLNEAQVTILVEDSAAMDYEKHHFLTYKLLAMEIDTPERFSATADIVIHLLDTNDNAPK
FSLDYYIARIPENSPGGSNVVSVTAIDPDSGPWGEVKYSIYGSGAELFLIQPTSGIIYTQ
PWASLDAEVRSKYNFYVKAEDAEGKYSLAEVFVTVLDLNDHPPAFNDNFLEKTMVIGAPV
KIEAVDDDAEVPNNVIEYAIMKAEPDNNIFDINTDTGEIKLKSYIKSMAIIQNITKKRDC
SWSLVVQARDRGQPSFSTTAVVKIDITEATKEGGPLGSFLLQNKNNPMQIIGMLAGIIGL
MVVVTVIISTATFLRNKKSNRILPTRRVRRRPQRQPFWNFRNPLKTSSTTGEKFKIKEEE
QEPEVNVENVNCNNNSPSVVRHWIPPPPPCAPSLPPPPPNYIHKDRQWTVPTVSTSVAPK
PRKKLNRQDTVNKALVSELKMKLEQKRMASNFT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattctttaggatgaagaatgagaagcttttaaatttgtcactgctttttgtg
tttgtgaacgcctgttttgcacaggccgactttgccccctatttctacgacaacggaccg
tacagcgacaacgggaacctggccctgtttagcctctcagaggacactcctattggtaca
cagatttattatctcaatggcacagaccctgaaggtcatgaggtgaggtacggcctttcc
gttgatccagggtcaaaagagtacttcaggatcaacccaaaatctggtagtataacactg
gtggaaaagctggacagagagaaacaagactctattgattttaatatcagtatcacagat
ggaaaaagcaaggttgttgaaaaagttactatatttgtgatggatgcaaatgatgaaaag
ccagagtttcaaaacttgccagcaattattgatgtagtggaaacagctgaatctggaagt
agcatctacaaagtggaggctgtggacagagacacaggctcaggaggctcagttacatac
tatctccagacacctcagtccaatttgtttgccatcgacagacatagtggtgtccttcgt
atcaaatcaggggaaacgttggattatgagaaaaccaaaactcattttgtcatagtcatt
gctaaggatggtggtggaaacttcaatggcaaggagcaatttctgtcatcctcttctacc
ctaaccatcaatatgatcgatgcacaagacactcctccatctttcattgggacgccctac
ttcggctatgtttatgaagtctcaaagccaggatctgaaatatttactgtttctgctgag
gatggtgatgtgggaaaccctaatccggtccagtactcatttgatgaaggtgatgatggt
gtttttggtataaatgaaacaagtggttgtatctcactgctgagtcctcctgtttacctg
aagagagaaatattcaacattaaagtcagggcatcagaagtaagtcctgaaggccagcta
ttggactacggggtgaccacagtggtgatccgtgttgtggacctaaacaataatcctccc
actttttatggagaaaatggcccacagagcatatttgagctgaccatgtacgagcatccg
cccgagggagaaatactacgaggactgaaaatcacagttaatgactctgatcagggtgca
aatgctaaatttaatctgcgactgattggaccaggaagaatgctacgagttgtcccccaa
actgtcctcaacgaggcccaagtcactattttagtggaggactctgctgccatggactat
gagaaacaccattttttaacatacaagttacttgcaatggagattgatactcctgagaga
ttcagcgccacagcagacattgtcattcatctcttggacaccaacgacaacgctcccaaa
ttctccttggattactacattgccagaattccagaaaactcgcccggcggctcaaatgtg
gtgtcagtcacggcaatagacccggactcaggaccttggggtgaagtgaagtactctatc
tatggatcaggtgctgagctgtttctgatccagcctacatctgggattatatacacgcag
ccctgggcaagcctggatgctgaggtgaggtccaagtataacttctatgtgaaggcagag
gatgctgagggaaagtacagcctggctgaagtctttgtgactgtgctggatctgaacgac
catcctcctgctttcaatgacaacttccttgagaagaccatggtgataggagcgcctgtg
aaaatagaggctgtagatgatgatgcagaagtaccaaacaatgttattgagtatgccatc
atgaaagctgagccagacaacaacatatttgacattaacactgacacgggagaaatcaaa
ctcaagtcatacatcaagtcaatggccatcattcagaacatcactaaaaagagagactgc
agctggtccctggtggttcaggcccgggaccgagggcagccatccttcagcaccactgca
gtcgtcaagattgacatcactgaagctactaaagaaggggggcctttgggatcattttta
ttgcagaataaaaacaacccaatgcaaattataggtatgcttgctggtattattggtctc
atggtcgtagtcaccgtcatcatctcaactgcaacgttcttgcgcaacaaaaagtccaac
cggatcctgcctacccgcagagtacggagaaggccccagagacagccattttggaacttc
agaaaccccctcaagacatcgtcaaccactggagagaaattcaaaattaaagaggaagag
caagagccagaggttaacgtggagaacgtcaactgtaacaacaactcccccagtgttgtg
agacactggattccacctccaccaccctgtgcaccgtctctgccccctccaccacctaac
tacatccacaaagaccggcagtggactgtaccaacagtctccacatcggtggcacccaaa
cctagaaagaagctgaatagacaggacactgtgaacaaagcactagtttcagagctcaaa
atgaaactggagcagaagaggatggcatctaattttacttag
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