Entry |
|
Symbol |
ccnh
|
Name |
|
KO |
|
Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108242835 (ccnh)
09124 Replication and repair
03420 Nucleotide excision repair
108242835 (ccnh)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108242835 (ccnh)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:kmr03021]
108242835 (ccnh)
03400 DNA repair and recombination proteins [BR:kmr03400]
108242835 (ccnh)
Transcription machinery [BR:kmr03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108242835 (ccnh)
DNA repair and recombination proteins [BR:kmr03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108242835 (ccnh)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG1:16618838..16665035
|
AA seq |
319 aa
MFHNSSQKKYWTFKSEDEVEQMRVSANEKFCKRVLETAKPVVSASVLLERYGEEVLFRHY
ERRMLEFCNAFKPAMPKSVVGTALMYFRRFYLNNSIMEHHPRIIMLTCAYLSCKVDEFNV
SSTQFVGNLVQETPAGQERVLEQILEYELLLIQQLNFHLVVHNPYRPMEGLLIDLKTRYP
MLENPESLRKSADDFLTQAVMTDAGLLFSPSQIALTAVLNSASRAGINMESYLTECLKLK
EDKETLTKMYDSMRRMKTLLKKYEPPNLEEVIVFKQKLEWIHAQLASSSNKRKRGYEEDG
HVAKEPRLAAEEWSDEDLL |
NT seq |
960 nt +upstreamnt +downstreamnt
atgttccacaacagctcacagaaaaaatactggacttttaaaagcgaggacgaagtggaa
cagatgagagtcagtgccaacgagaaattctgcaagagggtacttgaaactgcaaagcct
gtcgtgagtgcctccgtgctcctggagcgctatggggaggaggttttgtttcggcactat
gagaggaggatgcttgagttctgcaacgccttcaagcctgcgatgcccaaatcagtcgtg
ggtacagccctcatgtacttcagaagattctatctgaacaactccatcatggagcaccac
ccaaggattatcatgctgacttgtgcatacctgtcctgcaaagtggacgagttcaacgtg
tccagcacccagttcgtgggcaatctcgtgcaggagacgccggcaggacaggagcgggtc
ctggagcaaatcctcgagtacgagctgcttctgattcagcagctcaactttcacctggtc
gtccacaacccctacagacccatggaggggctgctcatcgacctgaagactcgatacccc
atgctggagaacccagagtctctgaggaaaagtgctgacgacttcctgacgcaggcagtc
atgacggacgcagggcttctgttctccccatctcagattgctctcactgctgtcctgaac
agtgcttccagagccggcatcaacatggagagttacctgacggaatgcctgaaactgaaa
gaggacaaagaaacactcacaaagatgtacgactcaatgagacgaatgaaaaccctcctt
aagaagtatgagccgcccaatctggaggaggtgatcgttttcaaacagaagttggagtgg
atccacgctcaacttgccagttcaagcaacaaacggaagaggggatatgaagaagatggt
cacgtagcaaaagaacctcgtttggctgcggaggaatggagtgatgaagacctcctctga |