Kryptolebias marmoratus (mangrove rivulus): 108242847
Help
Entry
108242847 CDS
T05608
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108242847 (gigyf1a)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108242847 (gigyf1a)
Surveillance factors
Other surveillance factors
108242847 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
108242847
NCBI-ProteinID:
XP_017283462
UniProt:
A0A3Q3F021
LinkDB
All DBs
Position
LG7:4179119..4199660
Genome browser
AA seq
1056 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSAAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGETGFYQRSIEDTEVGFGRSVREIHRSQSWDDRGERRFEKPLRREAVRPG
FEEAGGPGGPGRKEYTRADSDNWRTLREEQEEDEGEPGSNWRLSGPRRDDGGPRSAGWRD
HSGPGESRRRKFDFDFRDSEGHGPGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPLKKGGKETILEEELDFKGIEEEDEEDNFPDVERKSSESDKESKDAMSAAGDDKIKP
ASPSSSSPPAHCAPPSLEPGNIGQVMENCHLSNSHSVKASSSPADDLAPIGGSKAQLSST
APAVVTAAASSSSSSSLPPPPSSSAAPLLPPSGGDTEDDEGMKHLQQEAEKMVASLQDTS
LEEECFTQALQQQESRNTAAALPLTHESAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFT
MTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQRPQPSRGPSGTGNL
DQERLKKQQELAAAALYQQLQQQQQLFQLINRCSEQGIMPSMNRSMSVPDTGSMWDMHTS
ASQPSGSEASLWDLTMNPSTQGPTLEQLQKLQQERRDAELRAKREEEERKRREEKRRQQE
EQKRREEEDMFRRKQQQELIMKLLQQAPQQQGPGASSSSWSSASSSGLPKAGKSQSLTLL
ELQQQRAQQQRHSSMSMGGSSMGGQWSESVGMWGGPGGMEGKGRSGGSSGGMGMWDEAVK
NQTGLRGNSNNNMGLKNSRSSPSLSDQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWCEQ
MLHALNTSANNSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAK
QKANQQRQQQQLSKEVGGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKASLYDNQGGKMK
KKQSMMLHSDPSILGYSFHNPGECLSMNEMEMVEDY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattttgcaagatgagcccatgcagcccctggcactggtg
cccctcaccgaggaggagcagagaaacttctccatgtccgtgaacagtgcggcggtgctg
aggctcatgggaaagggagtgggtggggccgcaccagctggagttgtccgtggacgaggg
gccacacgaggtggccgaggccgaggccgtggtgagactggattctaccaaagaagtatt
gaggacactgaagtaggctttggccgcagcgtccgagagatacaccgcagccagagctgg
gatgaccggggtgagcgtcggtttgagaagccgctgcggcgggaggcggtgcgtcctggc
tttgaagaagctggaggtcccgggggtcccgggaggaaggagtacacaagggctgacagc
gataactggcgcaccctccgcgaggagcaggaggaggatgagggggagccgggcagcaac
tggaggctttctggaccccgcagggatgatggtggtcctcgctcagcgggctggcgggac
cacagcggtccaggtgaaagtcgccggaggaagttcgacttcgacttccgggactcggag
ggtcacggtcccgggcgccggcgtgcagggagcgaggggttggaggacgacagggacggc
ctgcccgaatggtgtacggatgaggaggatggggagatgggaacctttgactcctctgga
gccttcatgcctttgaagaagggtggtaaggagacaatcctggaggaggagttggacttc
aagggcatcgaggaggaggacgaggaggacaactttcctgatgtagagaggaagagctca
gaaagcgacaaagagagtaaagatgccatgtctgctgcaggggatgataaaataaagcca
gcatcaccctcctcttcctctcctccagcccactgtgcccctccatcactggaacctgga
aacattggtcaggtgatggagaactgtcatctgagcaacagccactcagtcaaggccagc
agctcacctgcagatgacttggctcccatcgggggctccaaggcccagctgagcagcacc
gcccctgccgtcgtcactgctgccgcctcctcctcctcctcctccagcctacctccccca
ccctcttcctctgctgctcctctcctccctccgtcaggaggagacaccgaggacgatgaa
ggcatgaagcacctgcaacaggaggcagagaagatggtggcgtcactgcaggacacctct
ttggaggaggagtgtttcacccaggctctgcagcagcaggagagcaggaatacggccgct
gctctgcctctaactcacgagtccgccatgaagtggttctacaaggacccgcagggcgag
atccaggggccgttcaccacggtggaaatgtgtgagtggttccaggccggctacttcacc
atgaccctgctggtgaagcggggctgcgatgagggctttcagcccctgggggacgtcatc
aagatgtggggccgcgtgcccttcgccccggggccctccccgccgcccctgctggtgaga
cagctcccaccgacgcagcgcccgcagcctagccgggggccctctgggactggaaacctg
gaccaggagcgtctgaagaagcagcaggagctggcggccgcagctctttatcagcagctc
caacagcagcagcagctattccagctcattaacaggtgcagtgagcagggtataatgcct
tcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctca
gcttcacagccgtcaggaagtgaagccagtctttgggacttaacaatgaatccttctact
cagggtccaactcttgaacagcttcagaagctccagcaggagaggcgagacgctgaactc
agggcgaagcgtgaggaggaggagcgtaagaggagggaggagaagagaaggcagcaggag
gagcagaaaaggagggaggaggaggacatgttcagacgcaagcagcagcaggaactgatc
atgaagctgctgcagcaggccccccagcagcagggaccgggggccagcagctccagttgg
agcagtgcttcttcatctgggctaccaaaggcaggaaagtcgcagagtctgactctgctg
gagttgcagcagcagcgggctcagcagcagaggcactccagcatgtccatggggggctcc
tccatgggcgggcagtggtcggagagcgtcggcatgtggggcgggcccggcggcatggag
ggcaagggcagaagcgggggctcctcgggcggcatggggatgtgggacgaggcggtgaag
aaccagacgggcctgcgtgggaacagcaacaacaacatgggcttgaagaacagccgtagc
agcccctccctcagcgatcagtacatgatgcgccgtaaacggacggaggaggaggagaag
ctgctgaagctgctgcagggcatgaagcctcaggacggcttcaccacctggtgtgaacag
atgctgcacgctctcaacacctctgccaacaactcctcctctctggatgttgccaccatc
gtggcgtacctgaaggaggtggagtctccctatgcagtgctggatttcatccggtcctac
cttggggacaccgtggaagccaaagagtttgccaaacagtttcttgagcgacgtgccaaa
cagaaagccaaccaacagaggcagcagcagcagttatcaaaggaggtgggtggattgaac
atgaacttccctctgcaggactcgatgcgaggtatgaatccgagcactctgcagtccatg
tttcaggccaaccacatgggcaaagctagtctctatgacaaccaggggggaaagatgaag
aagaaacagtccatgatgctgcactctgaccccagcatcttagggtactcattccacaac
ccgggcgaatgtctgagcatgaatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
