Kryptolebias marmoratus (mangrove rivulus): 108243004
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Entry
108243004 CDS
T05608
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
kmr03040
Spliceosome
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108243004 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
108243004 (alyref)
03015 mRNA surveillance pathway
108243004 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108243004 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108243004 (alyref)
03041 Spliceosome [BR:
kmr03041
]
108243004 (alyref)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108243004 (alyref)
TREX complex
108243004 (alyref)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108243004 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108243004 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
Motif
Other DBs
NCBI-GeneID:
108243004
NCBI-ProteinID:
XP_017283668
UniProt:
A0A3Q3AKD0
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All DBs
Position
LG12:complement(13829783..13833319)
Genome browser
AA seq
273 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGGAGRLGGGSGGFGGRGGGS
GPMRGRQNLSRARSRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGGAGVETGGKL
LVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNG
IPLDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRSRGFGGMQRGRGGGRGAGGSRGRG
RGGRGGSGAAKQQLSAEELDAQLDAYNARMDTS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatggatatgtctctagatgacattatcaaacagaacaggcagcagaga
ggtggaggccgcggaggaagaggccgaggccgcggaggctcaggcggcggccgcggtggt
ggaggcgctgggcgtctcggaggcggcagcggaggatttggaggccgaggcggcggatcc
ggccccatgaggggccgacagaacctgagccgcgctagaagcagaccgacaccttacagc
aggcctaaacagctcccagataagtggcagcacgacatgttcgacaacggcttcagcggc
ttcaatggcgctgctggaggcggtgggggaggagctggagtggaaaccggagggaagctc
ctcgtctccaatctggactttggcgtgtcagatgcagacattcaggaactttttgctgaa
tttggaactctgaagaaagctgccgttcattacgaccgatcaggaagaagcttggggaca
gcagatgtccattttgaaaggagggcagacgctcttaaagccatgaaacagtataacggc
atcccactcgatgggcgacctatgaatatacagcttgtcacgtcacagatcgatacacag
aggcggcctatgcagggactgaacagaggtggcggaggtatgaacagaagtcgtggcttc
ggcggcatgcagagaggtcgaggagggggacgtggcgcaggcggctcccggggtcgagga
cggggcggccgtggaggcagcggcgccgcaaagcagcagctgtcggcagaggaacttgac
gcccagttagacgcctacaatgccagaatggacaccagctaa
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